RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 POTEEQ6S8J3 1075 aa14.47□□□□□ -0.09
DDX39A-202ENST00000324340 CPXCR1Q8N123 301 aa14.47□□□□□ -0.09
DDX39A-202ENST00000324340 PDCL2Q8N4E4 241 aa14.47□□□□□ -0.09
DDX39A-202ENST00000324340 NAP1L4Q99733 375 aaKnown RBP14.47□□□□□ -0.09
DDX39A-202ENST00000324340 SLC45A1Q9Y2W3 748 aa14.47□□□□□ -0.09
DDX39A-202ENST00000324340 SPDYE3A6NKU9 549 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 CETPP11597 493 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 ALAS1P13196 640 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 GCFC2P16383 781 aaKnown RBP14.46□□□□□ -0.1
DDX39A-202ENST00000324340 SREBF1P36956 1147 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 PRPHP41219 470 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 LETM2Q2VYF4 491 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 SPRYD7Q5W111 196 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 MOXD1Q6UVY6 613 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 CREBRFQ8IUR6 639 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 CCAR1Q8IX12 1150 aaKnown RBP14.46□□□□□ -0.1
DDX39A-202ENST00000324340 ENGASEQ8NFI3 743 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 MRPS27Q92552 414 aaKnown RBP14.46□□□□□ -0.1
DDX39A-202ENST00000324340 TBC1D5Q92609 795 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 MBOAT7Q96N66 472 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 TEX13BQ9BXU2 312 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 ASCC2Q9H1I8 757 aaPredicted RBP14.46□□□□□ -0.1
DDX39A-202ENST00000324340 RIPK3Q9Y572 518 aa14.46□□□□□ -0.1
DDX39A-202ENST00000324340 CYP3A7-CYP3A51PA0A087WV96 503 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 NFIBO00712 420 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 CCNT1O60563 726 aaKnown RBP14.45□□□□□ -0.1
DDX39A-202ENST00000324340 CFBP00751 764 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 CYP3A4P08684 503 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 LIG1P18858 919 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 OSBPP22059 807 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 CYP3A7P24462 503 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 HOXA13P31271 388 aaPredicted RBP14.45□□□□□ -0.1
DDX39A-202ENST00000324340 IRX3P78415 501 aaPredicted RBP14.45□□□□□ -0.1
DDX39A-202ENST00000324340 GABPB1Q06547 395 aaPredicted RBP14.45□□□□□ -0.1
DDX39A-202ENST00000324340 MUM1L1Q5H9M0 696 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 RESP18Q5W5W9 173 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 SNRNP48Q6IEG0 339 aaKnown RBP14.45□□□□□ -0.1
DDX39A-202ENST00000324340 SHC4Q6S5L8 630 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 SMC1BQ8NDV3 1235 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 TRERF1Q96PN7 1200 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 GOLPH3LQ9H4A5 285 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 TMEM63CQ9P1W3 806 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 HPSEQ9Y251 543 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 MRVI1Q9Y6F6 885 aa14.45□□□□□ -0.1
DDX39A-202ENST00000324340 NEMFO60524 1076 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 CIITAP33076 1130 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 STAT3P40763 770 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 HUNKP57058 714 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 HERVK_113P62684 666 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 ARHGAP4P98171 946 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 FAM160A1Q05DH4 1040 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 PDE4CQ08493 712 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 SNW1Q13573 536 aaKnown RBP14.44□□□□□ -0.1
DDX39A-202ENST00000324340 SAPCD2Q86UD0 394 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 FSIP1Q8NA03 581 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 CLIC6Q96NY7 704 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 MTMR9Q96QG7 549 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 RNF146Q9NTX7 359 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 RPTORQ8N122 1335 aa14.44□□□□□ -0.1
DDX39A-202ENST00000324340 A0A0U1RQG5 324 aaPredicted RBP14.43□□□□□ -0.1
DDX39A-202ENST00000324340 TESPA1A2RU30 521 aaPredicted RBP14.43□□□□□ -0.1
DDX39A-202ENST00000324340 NR1I2O75469 434 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 CNMDO75829 334 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 TDP2O95551 362 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 GRIN1Q05586 938 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 IL17AQ16552 155 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 CCDC73Q6ZRK6 1079 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.43□□□□□ -0.1
DDX39A-202ENST00000324340 ANKRD23Q86SG2 305 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 RIOX2Q8IUF8 465 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 FMR1NBQ8N0W7 255 aaPredicted RBP14.43□□□□□ -0.1
DDX39A-202ENST00000324340 GTF3C2Q8WUA4 911 aaPredicted RBP14.43□□□□□ -0.1
DDX39A-202ENST00000324340 CSRNP2Q9H175 543 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 TMEM60Q9H2L4 133 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 TSPY26PQ9H489 355 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 EHMT1Q9H9B1 1298 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 DDX19AQ9NUU7 478 aaKnown RBP14.43□□□□□ -0.1
DDX39A-202ENST00000324340 BTBD7Q9P203 1132 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 PNMA3Q9UL41 463 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 RABGAP1Q9Y3P9 1069 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 FRMPD4Q14CM0 1322 aa14.43□□□□□ -0.1
DDX39A-202ENST00000324340 CCL15-CCL14A0A0B4J2E2 113 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 SLC37A4O43826 429 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 OR52Z1P0C646 297 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 PFKFB1P16118 471 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 CCL15Q16663 113 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 CCDC183Q5T5S1 534 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 FCHSD1Q86WN1 690 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 RASAL3Q86YV0 1011 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 CHST13Q8NET6 341 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 SYTL5Q8TDW5 730 aaPredicted RBP14.42□□□□□ -0.1
DDX39A-202ENST00000324340 BRI3BPQ8WY22 251 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 ACAD9Q9H845 621 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 HOMER2Q9NSB8 354 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 DACT1Q9NYF0 836 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 COL20A1Q9P218 1284 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 TLL2Q9Y6L7 1015 aa14.42□□□□□ -0.1
DDX39A-202ENST00000324340 A0A1B0GVL5 298 aa14.41□□□□□ -0.1
DDX39A-202ENST00000324340 BTBD19C9JJ37 291 aa14.41□□□□□ -0.1
DDX39A-202ENST00000324340 TOMM70O94826 608 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 391.2 ms