RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 PSMC4P43686 418 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 PTH1RQ03431 593 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 NFX1Q12986 1120 aaKnown RBP9.82□□□□□ -0.84
CD28-201ENST00000324106 ME3Q16798 604 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 SLFN12LQ6IEE8 588 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 EEPD1Q7L9B9 569 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 DAAM2Q86T65 1068 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 MCPH1Q8NEM0 835 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 TRIM11Q96F44 468 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 PIGSQ96S52 555 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 SPATA31A1Q5TZJ5 1347 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 RPS12P25398 132 aaKnown RBP9.82□□□□□ -0.84
CD28-201ENST00000324106 ANXA13P27216 316 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 SLC16A2P36021 539 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 RPS6KA1Q15418 735 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 CAPZA3Q96KX2 299 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 DDX23Q9BUQ8 820 aaKnown RBP9.82□□□□□ -0.84
CD28-201ENST00000324106 USP17L15C9J2P7 530 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 USP17L13C9JLJ4 530 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 USP17L11C9JVI0 530 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 USP17L18D6R9N7 530 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 USP17L22D6RA61 530 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 USP17L17D6RBQ6 530 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 USP17L19D6RCP7 530 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 USP17L20D6RJB6 530 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 PIK3CAP42336 1068 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 MFAP3P55082 362 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 USP17L24Q0WX57 530 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 TAF1CQ15572 869 aaPredicted RBP9.82□□□□□ -0.84
CD28-201ENST00000324106 STRIP1Q5VSL9 837 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 KCNV1Q6PIU1 500 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 C1orf228Q6PIY5 440 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 CMTR1Q8N1G2 835 aaKnown RBP9.82□□□□□ -0.84
CD28-201ENST00000324106 ATP2A3Q93084 1043 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 OTUD5Q96G74 571 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 TBC1D22BQ9NU19 505 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 RAB20Q9NX57 234 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 AFG3L2Q9Y4W6 797 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 TULP4Q9NRJ4 1543 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 ABCB11O95342 1321 aa9.82□□□□□ -0.84
CD28-201ENST00000324106 F8W8V4 182 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 NSFP46459 744 aaKnown RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 IFT81Q8WYA0 676 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 STAMQ92783 540 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 NAPGQ99747 312 aaPredicted RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 CCDC68Q9H2F9 335 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 RIC8AQ9NPQ8 531 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 CPSF3Q9UKF6 684 aaKnown RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 ARHGAP6O43182 974 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 KCNQ2O43526 872 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 MYL3P08590 195 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 IFRD2Q12894 506 aaPredicted RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 MTERF2Q49AM1 385 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 SCYL2Q6P3W7 929 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 CASC4Q6P4E1 433 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 FAM173BQ6P4H8 233 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 RRAGAQ7L523 313 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 TBCKQ8TEA7 893 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 RMDN3Q96TC7 470 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 ISCA1Q9BUE6 129 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 BLZF1Q9H2G9 400 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 PFDN4Q9NQP4 134 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 MROH7-TTC4A0A0A0MT08 1334 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 ADGRB3O60242 1522 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 SPDYE16A6NNV3 312 aaPredicted RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 PRPF3O43395 683 aaKnown RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 GPSM2P81274 684 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 KRT76Q01546 638 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 NOLC1Q14978 699 aaKnown RBP eCLIP9.81□□□□□ -0.84
CD28-201ENST00000324106 SPDYE2Q495Y8 402 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 HS1BP3Q53T59 392 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 SNRNP48Q6IEG0 339 aaKnown RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 CELF1Q92879 486 aaKnown RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 GJA10Q969M2 543 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 PARK7Q99497 189 aaKnown RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 DISC1Q9NRI5 854 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 FAM207AQ9NSI2 230 aaPredicted RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 RNF146Q9NTX7 359 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 IPO11Q9UI26 975 aaKnown RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 AMFRQ9UKV5 643 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 UTYO14607 1347 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 LRMPQ12912 555 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 C8orf74Q6P047 294 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 OR8K1Q8NGG5 319 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 NEK9Q8TD19 979 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 FAM149B1Q96BN6 582 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 ACAD9Q9H845 621 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 LRRC4Q9HBW1 653 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 ZFYVE28Q9HCC9 887 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 NLRC4Q9NPP4 1024 aa9.81□□□□□ -0.84
CD28-201ENST00000324106 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.81□□□□□ -0.84
CD28-201ENST00000324106 CNOT7Q9UIV1 285 aaKnown RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 V9GYY5 206 aaPredicted RBP9.81□□□□□ -0.84
CD28-201ENST00000324106 ESYT2A0FGR8 921 aa9.8□□□□□ -0.84
CD28-201ENST00000324106 K7ERI5 159 aa9.8□□□□□ -0.84
CD28-201ENST00000324106 MED7O43513 233 aa9.8□□□□□ -0.84
CD28-201ENST00000324106 LDHAP00338 332 aaKnown RBP9.8□□□□□ -0.84
CD28-201ENST00000324106 XRCC6P12956 609 aaKnown RBP eCLIP9.8□□□□□ -0.84
CD28-201ENST00000324106 PFKFB1P16118 471 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms