RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 NUP153P49790 1475 aaKnown RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 AOC3Q16853 763 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 ADALQ6DHV7 355 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 MYO18AQ92614 2054 aaKnown RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 POLR2DO15514 142 aaKnown RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 UAP1Q16222 522 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 PDCD10Q9BUL8 212 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 TUBB1Q9H4B7 451 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 ERBB4Q15303 1308 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 RGS16O15492 202 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 EIF4A2Q14240 407 aaKnown RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 ATP8B4Q8TF62 1192 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 ATP6V1HQ9UI12 483 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 TTC37Q6PGP7 1564 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 SART1O43290 800 aaKnown RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 E2F6O75461 281 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 E2F4Q16254 413 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 AHI1Q8N157 1196 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 RILPQ96NA2 401 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 TRPC7Q9HCX4 862 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 F8W8V4 182 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 GUCY1A3Q02108 690 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 GNPTABQ3T906 1256 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 DENND6AQ8IWF6 608 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 STAT1P42224 750 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 SLC1A4P43007 532 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 RNASE11Q8TAA1 199 aaKnown RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 BICC1Q9H694 974 aaKnown RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 ARHGAP31Q2M1Z3 1444 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 FAM83GA6ND36 823 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 AP1S2P56377 157 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 BPIFB4P59827 614 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 NBPF14Q5TI25 921 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 MRPL44Q9H9J2 332 aaKnown RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 SGSM2O43147 1006 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 SERPINB2P05120 415 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 H7C1D1 291 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 FOSL2P15408 326 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 STX2P32856 288 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 ITGB3BPQ13352 177 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 GPHNQ9NQX3 736 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 GNGT1P63211 74 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 KRT77Q7Z794 578 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 ZNF274Q96GC6 653 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 MPP6Q9NZW5 540 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 hCG_1984214I3L0E3 225 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 ZNF189O75820 626 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 ELF2Q15723 593 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 SND1Q7KZF4 910 aaKnown RBP eCLIP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 BHMTQ93088 406 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 FANCEQ9HB96 536 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 TNNI3KQ59H18 835 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 PPANQ9NQ55 473 aaKnown RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 FPGT-TNNI3KV9GXZ4 949 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 ATP10BO94823 1461 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 MYCNP04198 464 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-201ENST00000322507 HSPA6P17066 643 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 TRAPPC10P48553 1259 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 KLHL30Q0D2K2 578 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 ASPHQ12797 758 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 CCDC105Q8IYK2 499 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 LPIN2Q92539 896 aa10.53□□□□□ -0.72
COL12A1-201ENST00000322507 CDC25BP30305 580 aa10.52□□□□□ -0.72
COL12A1-201ENST00000322507 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.52□□□□□ -0.72
COL12A1-201ENST00000322507 HAUS4Q9H6D7 363 aa10.52□□□□□ -0.72
COL12A1-201ENST00000322507 PICALMQ13492 652 aa10.52□□□□□ -0.72
COL12A1-201ENST00000322507 KIF9Q9HAQ2 790 aa10.52□□□□□ -0.72
COL12A1-201ENST00000322507 A0A1W2PP64 1363 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 KPNA2P52292 529 aaKnown RBP10.52□□□□□ -0.73
COL12A1-201ENST00000322507 ANKRD13AQ8IZ07 590 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 SLC27A2O14975 620 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 ZBTB24O43167 697 aaPredicted RBP10.52□□□□□ -0.73
COL12A1-201ENST00000322507 NR1I2O75469 434 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 DMPKQ09013 629 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 ELMSAN1Q6PJG2 1045 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 MICALL2Q8IY33 904 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 ETAA1Q9NY74 926 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 NFE2L3Q9Y4A8 694 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 ARHGEF37A1IGU5 675 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 GOLGA8MH3BSY2 632 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.73
COL12A1-201ENST00000322507 RASA3Q14644 834 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 RNF207Q6ZRF8 634 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 STX19Q8N4C7 294 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 RTL3Q8N8U3 475 aaKnown RBP10.52□□□□□ -0.73
COL12A1-201ENST00000322507 ZBED2Q9BTP6 218 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 MRPL40Q9NQ50 206 aaKnown RBP10.52□□□□□ -0.73
COL12A1-201ENST00000322507 MORC2Q9Y6X9 1032 aaPredicted RBP10.52□□□□□ -0.73
COL12A1-201ENST00000322507 NBPF26B4DH59 902 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 KRT15P19012 456 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 GJC1P36383 396 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 NBPF15Q8N660 670 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 ANKRD27Q96NW4 1050 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 ATPIF1Q9UII2 106 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 AK8Q96MA6 479 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 VPS16Q9H269 839 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 PYGBP11216 843 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms