RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 MCM6Q14566 821 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 WHAMMP3Q1A5X7 153 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 TMEM119Q4V9L6 283 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 FKBP15Q5T1M5 1219 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 ERGIC2Q96RQ1 377 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 NOC4LQ9BVI4 516 aaKnown RBP24.95■■□□□ 1.58
PNKP-201ENST00000322344 ABCB11O95342 1321 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 NRXN2Q9P2S2 1712 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 MYMKA6NI61 221 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 G3V3G9 751 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 TRIM21P19474 475 aaKnown RBP24.95■■□□□ 1.58
PNKP-201ENST00000322344 PDE6BP35913 854 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 PSMD2Q13200 908 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 CCDC96Q2M329 555 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 DCAF8Q5TAQ9 597 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 APOBEC3HQ6NTF7 200 aaKnown RBP24.95■■□□□ 1.58
PNKP-201ENST00000322344 FOXR2Q6PJQ5 311 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 KRT27Q7Z3Y8 459 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 CLEC10AQ8IUN9 316 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 GUF1Q8N442 669 aaKnown RBP24.95■■□□□ 1.58
PNKP-201ENST00000322344 SNX29Q8TEQ0 813 aa24.95■■□□□ 1.58
PNKP-201ENST00000322344 CYLC1P35663 651 aaPredicted RBP24.94■■□□□ 1.58
PNKP-201ENST00000322344 DOK7Q18PE1 504 aa24.94■■□□□ 1.58
PNKP-201ENST00000322344 PARD6BQ9BYG5 372 aa24.94■■□□□ 1.58
PNKP-201ENST00000322344 SEMA6BQ9H3T3 888 aa24.94■■□□□ 1.58
PNKP-201ENST00000322344 QTRT2Q9H974 415 aaKnown RBP24.94■■□□□ 1.58
PNKP-201ENST00000322344 REXO2Q9Y3B8 237 aaKnown RBP24.94■■□□□ 1.58
PNKP-201ENST00000322344 GREB1LQ9C091 1923 aaPredicted RBP24.94■■□□□ 1.58
PNKP-201ENST00000322344 PPP1R11O60927 126 aaPredicted RBP24.93■■□□□ 1.58
PNKP-201ENST00000322344 SCNN1DP51172 638 aa24.93■■□□□ 1.58
PNKP-201ENST00000322344 FAM193AP78312 1265 aa24.93■■□□□ 1.58
PNKP-201ENST00000322344 SEPT2Q15019 361 aa24.93■■□□□ 1.58
PNKP-201ENST00000322344 MIIPQ5JXC2 388 aa24.93■■□□□ 1.58
PNKP-201ENST00000322344 CC2D1AQ6P1N0 951 aaPredicted RBP24.93■■□□□ 1.58
PNKP-201ENST00000322344 WDR59Q6PJI9 974 aa24.93■■□□□ 1.58
PNKP-201ENST00000322344 CCDC170Q8IYT3 715 aa24.93■■□□□ 1.58
PNKP-201ENST00000322344 SLC39A2Q9NP94 309 aa24.93■■□□□ 1.58
PNKP-201ENST00000322344 DDX25Q9UHL0 483 aaKnown RBP24.93■■□□□ 1.58
PNKP-201ENST00000322344 MPHOSPH10O00566 681 aaKnown RBP24.93■■□□□ 1.58
PNKP-201ENST00000322344 CDK17Q00537 523 aa24.93■■□□□ 1.58
PNKP-201ENST00000322344 MRIQ9BWK5 157 aa24.93■■□□□ 1.58
PNKP-201ENST00000322344 SLC26A4O43511 780 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 LRRC63Q05C16 580 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 BRD3Q15059 726 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 UBE2SQ16763 222 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 TTBK2Q6IQ55 1244 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 PODNQ7Z5L7 613 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 EHBP1Q8NDI1 1231 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 MXD3Q9BW11 206 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 DHX36Q9H2U1 1008 aaKnown RBP24.92■■□□□ 1.58
PNKP-201ENST00000322344 PSTPIP2Q9H939 334 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 ARFGAP3Q9NP61 516 aa24.92■■□□□ 1.58
PNKP-201ENST00000322344 POTEMA6NI47 508 aa24.91■■□□□ 1.58
PNKP-201ENST00000322344 CRKP46108 304 aa24.91■■□□□ 1.58
PNKP-201ENST00000322344 MASTLQ96GX5 879 aa24.91■■□□□ 1.58
PNKP-201ENST00000322344 ZDHHC15Q96MV8 337 aa24.91■■□□□ 1.58
PNKP-201ENST00000322344 CCDC151A5D8V7 595 aa24.91■■□□□ 1.58
PNKP-201ENST00000322344 FKBP1AP62942 108 aaKnown RBP24.91■■□□□ 1.58
PNKP-201ENST00000322344 PROM2Q8N271 834 aa24.91■■□□□ 1.58
PNKP-201ENST00000322344 DCAF4Q8WV16 495 aa24.91■■□□□ 1.58
PNKP-201ENST00000322344 PCMTD1Q96MG8 357 aaPredicted RBP24.91■■□□□ 1.58
PNKP-201ENST00000322344 EPC1Q9H2F5 836 aa24.91■■□□□ 1.58
PNKP-201ENST00000322344 RASSF10A6NK89 507 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 USP17L10C9JJH3 530 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 IPO7O95373 1038 aaKnown RBP24.9■■□□□ 1.58
PNKP-201ENST00000322344 ATP2B2Q01814 1243 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 MKL1Q969V6 931 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 ATF5Q9Y2D1 282 aaPredicted RBP24.9■■□□□ 1.58
PNKP-201ENST00000322344 KDM3AQ9Y4C1 1321 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 EIF3CLB5ME19 914 aaKnown RBP24.9■■□□□ 1.58
PNKP-201ENST00000322344 PSMD14O00487 310 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 MARCH6O60337 910 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 ABL1P00519 1130 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 EHHADHQ08426 723 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 VWA3BQ502W6 1294 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 HPS3Q969F9 1004 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 EIF3CQ99613 913 aaKnown RBP24.9■■□□□ 1.58
PNKP-201ENST00000322344 NT5C3AQ9H0P0 336 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 AGPAT5Q9NUQ2 364 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 NYAP2Q9P242 653 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 PUF60Q9UHX1 559 aaKnown RBP24.9■■□□□ 1.58
PNKP-201ENST00000322344 PRDM4Q9UKN5 801 aa24.9■■□□□ 1.58
PNKP-201ENST00000322344 SLC16A2P36021 539 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 PLA2G4AP47712 749 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 HERVK_113P62684 666 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 MAN2A1Q16706 1144 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 HYIQ5T013 277 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 KCTD1Q719H9 257 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 DYMQ7RTS9 669 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 DDX12PQ92771 950 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 HAS1Q92839 578 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 TSG101Q99816 390 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 GUCA1BQ9UMX6 200 aa24.89■■□□□ 1.57
PNKP-201ENST00000322344 HDLBPQ00341 1268 aaKnown RBP24.88■■□□□ 1.57
PNKP-201ENST00000322344 AMPD2Q01433 879 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 NFIAQ12857 509 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 MSANTD4Q8NCY6 345 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 MYO6Q9UM54 1294 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 CTAGE15A4D2H0 777 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 KRT86O43790 486 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms