RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 TMEM110-MUSTN1A8MSY1 372 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 MAP2K7O14733 419 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 USP17L8P0C7I0 530 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 HOOK3Q86VS8 718 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 TMEM139Q8IV31 216 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 CACNA2D3Q8IZS8 1091 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 NAP1L4Q99733 375 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 SH3GLB2Q9NR46 395 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 STK17AQ9UEE5 414 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 NWD1Q149M9 1564 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 SRGNP10124 158 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 CCDC25Q86WR0 208 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 SYCE1Q8N0S2 351 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 PLCD4Q9BRC7 762 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 LRRC1Q9BTT6 524 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 RIC8AQ9NPQ8 531 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 XDHP47989 1333 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 MEGF6O75095 1541 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 F8W031 263 aaPredicted RBP14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 CYP2D6P10635 497 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 CRKLP46109 303 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 TRAPPC11Q7Z392 1133 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 DGKHQ86XP1 1220 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 FAM13AO94988 1023 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 MECOMQ03112 1051 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 GLE1Q53GS7 698 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 HAUS3Q68CZ6 603 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 ARMCX3Q9UH62 379 aaPredicted RBP14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 FMN2Q9NZ56 1722 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 LRRC53A6NM62 1247 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 MCTP2Q6DN12 878 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 GPBP1Q86WP2 473 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 PLVAPQ9BX97 442 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 PCDHA12Q9UN75 941 aa14.03□□□□□ -0.16
DNMT3A-202ENST00000321117 CETN2P41208 172 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 WHAMMQ8TF30 809 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 DYNLL2Q96FJ2 89 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 COL4A3BPQ9Y5P4 624 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 SPDYE3A6NKU9 549 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 NCK2O43639 380 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 LRRC63Q05C16 580 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 SF3A3Q12874 501 aaKnown RBP eCLIP14.02□□□□□ -0.162e-6■■■□□ 16.8
DNMT3A-202ENST00000321117 TXNRD1Q16881 649 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 LRRC31Q6UY01 552 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 CCDC50Q8IVM0 306 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 DPH5Q9H2P9 285 aa14.02□□□□□ -0.16
DNMT3A-202ENST00000321117 PIK3C2AO00443 1686 aa14.02□□□□□ -0.17
DNMT3A-202ENST00000321117 CALUO43852 315 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-202ENST00000321117 H2AFZP0C0S5 128 aa14.02□□□□□ -0.17
DNMT3A-202ENST00000321117 CYP19A1P11511 503 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-202ENST00000321117 ADAM9Q13443 819 aa14.02□□□□□ -0.17
DNMT3A-202ENST00000321117 ANKRD40Q6AI12 368 aa14.02□□□□□ -0.17
DNMT3A-202ENST00000321117 H2AFVQ71UI9 128 aa14.02□□□□□ -0.17
DNMT3A-202ENST00000321117 SLAIN2Q9P270 581 aa14.02□□□□□ -0.17
DNMT3A-202ENST00000321117 C1orf167Q5SNV9 1468 aa14.02□□□□□ -0.17
DNMT3A-202ENST00000321117 USP17L3A6NCW0 530 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 USP17L4A6NCW7 530 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 XRCC5P13010 732 aaKnown RBP14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 TNFAIP3P21580 790 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 CORO7P57737 925 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 SEMA3FQ13275 785 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 GKAP1Q5VSY0 366 aaPredicted RBP14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 USP17L1Q7RTZ2 530 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 AMFRQ9UKV5 643 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 A0A0U1RQJ8 604 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 SERPING1P05155 500 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 HSPA2P54652 639 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 U2AF1L4Q8WU68 220 aaKnown RBP14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 RAB17Q9H0T7 212 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 DCP1AQ9NPI6 582 aaPredicted RBP14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 ADAMTS1Q9UHI8 967 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 KDM3AQ9Y4C1 1321 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 ESYT3A0FGR9 886 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 RFC4P35249 363 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 CALCOCO2Q13137 446 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 CCSER1Q9C0I3 900 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 NBPF3Q9H094 633 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 HSD3B7Q9H2F3 369 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 RHOBTB3O94955 611 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 IRAK1P51617 712 aa14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 PDS5AQ29RF7 1337 aaKnown RBP14.01□□□□□ -0.17
DNMT3A-202ENST00000321117 A0A087X0B3 334 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 FCER1AP12319 257 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 GFPT1Q06210 699 aaPredicted RBP14□□□□□ -0.17
DNMT3A-202ENST00000321117 PNMA8AQ86V59 439 aaPredicted RBP14□□□□□ -0.17
DNMT3A-202ENST00000321117 FAM133AQ8N9E0 248 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 BAZ2BQ9UIF8 2168 aaKnown RBP14□□□□□ -0.17
DNMT3A-202ENST00000321117 FRMPD2Q68DX3 1309 aaPredicted RBP14□□□□□ -0.17
DNMT3A-202ENST00000321117 NRXN3Q9Y4C0 1643 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 LOC102724428A0A0B4J2F2 783 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 HMGB1P1B2RPK0 211 aaPredicted RBP14□□□□□ -0.17
DNMT3A-202ENST00000321117 SIK1P57059 783 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 UNC13DQ70J99 1090 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 FMNL3Q8IVF7 1028 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 TRIM9Q9C026 710 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 MTUS1Q9ULD2 1270 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 DNM3Q9UQ16 869 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 A0A1B0GUA9 196 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 PALMO75781 387 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 918.5 ms