RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ACTN1P12814 892 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 PTK2Q05397 1052 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 PDE8AO60658 829 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 SYMPKQ92797 1274 aaKnown RBP18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 MRFAP1Q9Y605 127 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 RASGRF2O14827 1237 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 TRMT10CQ7L0Y3 403 aaKnown RBP18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 CEP70Q8NHQ1 597 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 GGA1Q9UJY5 639 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 ZBTB24O43167 697 aaPredicted RBP18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 PFKFB2O60825 505 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 DHX9Q08211 1270 aaKnown RBP18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 DYNC1I2Q13409 638 aaKnown RBP18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 KRT26Q7Z3Y9 468 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 TADA3O75528 432 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 C2orf54Q08AI8 447 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 STK17AQ9UEE5 414 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 OCA2Q04671 838 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 GDAP1Q8TB36 358 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 MFAP3P55082 362 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 PPARAQ07869 468 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 PSTPIP2Q9H939 334 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 KIF1CO43896 1103 aaKnown RBP18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 NBPF10Q6P3W6 841 aaKnown RBP18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 NUDCD3Q8IVD9 361 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 ZNF710Q8N1W2 664 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 TTC1Q99614 292 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 PEG3Q9GZU2 1588 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 GNPTABQ3T906 1256 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 TRIML2Q8N7C3 387 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 TNNQ9UQP3 1299 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 IPO5O00410 1097 aaKnown RBP18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 PRDM1O75626 825 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 ARHGEF16Q5VV41 709 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 ZMYND12Q9H0C1 365 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 PCDHA7Q9UN72 937 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 TNRQ92752 1358 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 TRAPPC8Q9Y2L5 1435 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 PYGLP06737 847 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 PALMDQ9NP74 551 aa18.28■□□□□ 0.52
SMCHD1-201ENST00000320876 ENC1O14682 589 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 NEK8Q86SG6 692 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 TTC25Q96NG3 672 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 TYW5A2RUC4 315 aaKnown RBP18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 DHTKD1Q96HY7 919 aaPredicted RBP18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 GSDMAQ96QA5 445 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 RTEL1Q9NZ71 1219 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 GPATCH8Q9UKJ3 1502 aaKnown RBP18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 CARMIL3Q8ND23 1372 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 A0A1W2PQ27 194 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 A0A1W2PQ64 194 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 A0A1W2PQD8 194 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 TDRD7Q8NHU6 1098 aaKnown RBP18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 ESRRAP11474 423 aaPredicted RBP18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 ABCD1P33897 745 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 RFX6Q8HWS3 928 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 FAM89AQ96GI7 184 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 DBNDD2Q9BQY9 259 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 GRAMD1BQ3KR37 738 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 SAAL1Q96ER3 474 aa18.27■□□□□ 0.52
SMCHD1-201ENST00000320876 SH3TC1Q8TE82 1336 aa18.27■□□□□ 0.51
SMCHD1-201ENST00000320876 IKBKBO14920 756 aa18.27■□□□□ 0.51
SMCHD1-201ENST00000320876 MYL1P05976 194 aa18.27■□□□□ 0.51
SMCHD1-201ENST00000320876 ZFXP17010 805 aaPredicted RBP18.27■□□□□ 0.51
SMCHD1-201ENST00000320876 UHMK1Q8TAS1 419 aaKnown RBP18.27■□□□□ 0.51
SMCHD1-201ENST00000320876 DISC1Q9NRI5 854 aa18.27■□□□□ 0.51
SMCHD1-201ENST00000320876 H3BRJ5 948 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 TOM1L1O75674 476 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 C4orf50Q6ZRC1 276 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 TRIM59Q8IWR1 403 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 EMBQ6PCB8 327 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 NEK9Q8TD19 979 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 TMEM60Q9H2L4 133 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 SYCE1LA8MT33 242 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 MAPK4P31152 587 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 PLTPP55058 493 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 IQANK1A0A1B0GTG1 560 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 CHMP6Q96FZ7 201 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 E9PMD0 336 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 DDAH1O94760 285 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 NCF2P19878 526 aaPredicted RBP18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 MESDQ14696 234 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 NAA35Q5VZE5 725 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 PDXDC1Q6P996 788 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 CRLF3Q8IUI8 442 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 GIPC2Q8TF65 315 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 DEPDC1BQ8WUY9 529 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 PAWRQ96IZ0 340 aaKnown RBP18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 GCNT4Q9P109 453 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 hCG_1642624A0A1W2PR95 340 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 TADA2BQ86TJ2 420 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 ATP6V1E2Q96A05 226 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 ADPGKQ9BRR6 497 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 MRPL40Q9NQ50 206 aaKnown RBP18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 TBK1Q9UHD2 729 aa18.26■□□□□ 0.51
SMCHD1-201ENST00000320876 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 GLG1Q92896 1179 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 SLC39A2Q9NP94 309 aa18.25■□□□□ 0.51
SMCHD1-201ENST00000320876 ATP5JP18859 108 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms