RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 TTC36A6NLP5 189 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 SMNDC1O75940 238 aaKnown RBP eCLIP16.54■□□□□ 0.24
SCAP-202ENST00000320017 PDE6AP16499 860 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 ITPK1Q13572 414 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 UBLCP1Q8WVY7 318 aaPredicted RBP16.54■□□□□ 0.24
SCAP-202ENST00000320017 PRCCQ92733 491 aaPredicted RBP16.54■□□□□ 0.24
SCAP-202ENST00000320017 PLIN2Q99541 437 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 CSRNP2Q9H175 543 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 HOMER3Q9NSC5 361 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 JCADQ9P266 1359 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 USO1O60763 962 aaKnown RBP16.54■□□□□ 0.24
SCAP-202ENST00000320017 GLI1P08151 1106 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 KIF5BP33176 963 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 TAF11Q15544 211 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 CREG2Q8IUH2 290 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 KLHL7Q8IXQ5 586 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 EPSTI1Q96J88 318 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 NOVA2Q9UNW9 492 aaKnown RBP16.54■□□□□ 0.24
SCAP-202ENST00000320017 CAPN6Q9Y6Q1 641 aa16.54■□□□□ 0.24
SCAP-202ENST00000320017 CDKL5O76039 1030 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 PDHA1P08559 390 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 CCDC42Q96M95 316 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 NLRP3Q96P20 1036 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 PAGR1Q9BTK6 254 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 PANK4Q9NVE7 773 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 LMO7Q8WWI1 1683 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 FNBP4Q8N3X1 1017 aaPredicted RBP16.53■□□□□ 0.24
SCAP-202ENST00000320017 KRT12Q99456 494 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 UBN2Q6ZU65 1347 aa16.53■□□□□ 0.24
SCAP-202ENST00000320017 PHRF1Q9P1Y6 1649 aaKnown RBP16.53■□□□□ 0.24
SCAP-202ENST00000320017 CTNNA1P35221 906 aaKnown RBP16.52■□□□□ 0.24
SCAP-202ENST00000320017 SPAG1Q07617 926 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 ITGB3BPQ13352 177 aaPredicted RBP16.52■□□□□ 0.24
SCAP-202ENST00000320017 ZNF174Q15697 407 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 CDKAL1Q5VV42 579 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 SUSD4Q5VX71 490 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 ANKS4BQ8N8V4 417 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 SLC4A4Q9Y6R1 1079 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.24
SCAP-202ENST00000320017 PCK1P35558 622 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 SARSP49591 514 aaKnown RBP16.52■□□□□ 0.24
SCAP-202ENST00000320017 BCAMP50895 628 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 DPYDQ12882 1025 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 GLE1Q53GS7 698 aaKnown RBP16.52■□□□□ 0.24
SCAP-202ENST00000320017 CCDC197Q8NCU1 140 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 SELENOSQ9BQE4 189 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.24
SCAP-202ENST00000320017 HYOU1Q9Y4L1 999 aa16.52■□□□□ 0.24
SCAP-202ENST00000320017 ANO9A1A5B4 782 aa16.52■□□□□ 0.23
SCAP-202ENST00000320017 PCCAP05165 728 aaPredicted RBP16.52■□□□□ 0.23
SCAP-202ENST00000320017 POLE2P56282 527 aa16.52■□□□□ 0.23
SCAP-202ENST00000320017 TRADDQ15628 312 aa16.52■□□□□ 0.23
SCAP-202ENST00000320017 RAPGEF5Q92565 580 aa16.52■□□□□ 0.23
SCAP-202ENST00000320017 NHEJ1Q9H9Q4 299 aaPredicted RBP16.52■□□□□ 0.23
SCAP-202ENST00000320017 ITIH6Q6UXX5 1313 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 ERICH2A1L162 156 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 BUB1O43683 1085 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 TRIM37O94972 964 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 ZFYP08048 801 aaPredicted RBP16.51■□□□□ 0.23
SCAP-202ENST00000320017 ADD2P35612 726 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 PPP4R3AQ6IN85 833 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 IQCKQ8N0W5 287 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 SPICE1Q8N0Z3 855 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 TTLL11Q8NHH1 800 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 NELFBQ8WX92 580 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 ACTN4O43707 911 aaKnown RBP16.51■□□□□ 0.23
SCAP-202ENST00000320017 CTSWP56202 376 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 KIF2BQ8N4N8 673 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 MDM1Q8TC05 714 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 EZH1Q92800 747 aaPredicted RBP16.51■□□□□ 0.23
SCAP-202ENST00000320017 CAVIN3Q969G5 261 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 ZFATQ9P243 1243 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 SMIM23A6NLE4 172 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 PAK1Q13153 545 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 CUL4BQ13620 913 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 TRIM22Q8IYM9 498 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 IFIH1Q9BYX4 1025 aaKnown RBP16.51■□□□□ 0.23
SCAP-202ENST00000320017 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 AGPAT5Q9NUQ2 364 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 MAGEC2Q9UBF1 373 aaPredicted RBP16.51■□□□□ 0.23
SCAP-202ENST00000320017 RPS6KL1Q9Y6S9 549 aa16.51■□□□□ 0.23
SCAP-202ENST00000320017 LRRD1A4D1F6 860 aa16.5■□□□□ 0.23
SCAP-202ENST00000320017 GNPATO15228 680 aa16.5■□□□□ 0.23
SCAP-202ENST00000320017 AKR1B10O60218 316 aa16.5■□□□□ 0.23
SCAP-202ENST00000320017 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
SCAP-202ENST00000320017 PTPREP23469 700 aa16.5■□□□□ 0.23
SCAP-202ENST00000320017 RTN1Q16799 776 aa16.5■□□□□ 0.23
SCAP-202ENST00000320017 TYW1BQ6NUM6 668 aa16.5■□□□□ 0.23
SCAP-202ENST00000320017 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
SCAP-202ENST00000320017 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
SCAP-202ENST00000320017 EBF2Q9HAK2 575 aa16.5■□□□□ 0.23
SCAP-202ENST00000320017 SRP68Q9UHB9 627 aaKnown RBP16.5■□□□□ 0.23
SCAP-202ENST00000320017 FBXO2Q9UK22 296 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms