RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 AFAP1L1Q8TED9 768 aa17.33■□□□□ 0.36
SHROOM1-201ENST00000319854 ROBO3Q96MS0 1386 aa17.33■□□□□ 0.36
SHROOM1-201ENST00000319854 SLC37A4O43826 429 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 CPP00450 1065 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 SSBP05455 408 aaKnown RBP eCLIP17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 IDEP14735 1019 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 COPB1P53618 953 aaKnown RBP17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 PCMTD1Q96MG8 357 aaPredicted RBP17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 SPZ1Q9BXG8 430 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 ATP6V0A2Q9Y487 856 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 ZC3H4Q9UPT8 1303 aaKnown RBP17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 MYH8P13535 1937 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 ZMYND10O75800 440 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 SRGNP10124 158 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 DNAJC21Q5F1R6 531 aaKnown RBP17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 TCP11X2Q5H9J9 407 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 CDC42EP5Q6NZY7 148 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 EFCAB13Q8IY85 973 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 ANKRD20A12PQ8NF67 263 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 CRAMP1Q96RY5 1269 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 SLC39A2Q9NP94 309 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 MED4Q9NPJ6 270 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 TFR2Q9UP52 801 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 LIG3P49916 1009 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 KRT25Q7Z3Z0 450 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 NAPGQ99747 312 aaPredicted RBP17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 RWDD2AQ9UIY3 292 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L10C9JJH3 530 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 NKRFO15226 690 aaKnown RBP eCLIP17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 HOXA10P31260 410 aaPredicted RBP17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 ARHGAP25P42331 645 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 STK4Q13043 487 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 MMS22LQ6ZRQ5 1243 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 DHX37Q8IY37 1157 aaKnown RBP17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 RMND1Q9NWS8 449 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 TRIM10Q9UDY6 481 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 ERVK-24P63145 666 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 IKQ13123 557 aaPredicted RBP17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 SUGP1Q8IWZ8 645 aaKnown RBP17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 CTAGE1Q96RT6 745 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 HDAC6Q9UBN7 1215 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 LAMB1P07942 1786 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
SHROOM1-201ENST00000319854 GAKO14976 1311 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 KRT9P35527 623 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 PBX1P40424 430 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 CALCRLQ16602 461 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 GSPT2Q8IYD1 628 aaKnown RBP17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 ADGRF4Q8IZF3 695 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 CDK5RAP3Q96JB5 506 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 HINFPQ9BQA5 517 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 SLF1Q9BQI6 1058 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 LZTS2Q9BRK4 669 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 COA1Q9GZY4 146 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 HPCAL4Q9UM19 191 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 A0A087WUV0 522 aaPredicted RBP17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 MFAP3LO75121 409 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 CHRNA5P30532 468 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 ADCY7P51828 1080 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 AMPD2Q01433 879 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 NUDT12Q9BQG2 462 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 EXOC1Q9NV70 894 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 B4DLN1 442 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 ONECUT3O60422 494 aaPredicted RBP17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 GDF11O95390 407 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 KLK7P49862 253 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 WDR93Q6P2C0 686 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 USP17L6PQ6QN14 398 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 CSGALNACT2Q8N6G5 542 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 TEKT1Q969V4 418 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 LRWD1Q9UFC0 647 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 MYO6Q9UM54 1294 aa17.3■□□□□ 0.36
SHROOM1-201ENST00000319854 ENC1O14682 589 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 CCT5P48643 541 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 AARSP49588 968 aaKnown RBP eCLIP17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 MCTP2Q6DN12 878 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 IRF2BP1Q8IU81 584 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 CHP1Q99653 195 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 GBP3Q9H0R5 595 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 PSMA7O14818 248 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 TTLL1O95922 423 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 GGCXP38435 758 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 WHAMMP3Q1A5X7 153 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 FBXW10Q5XX13 1052 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 ADSSL1Q8N142 457 aa17.29■□□□□ 0.36
SHROOM1-201ENST00000319854 PPP1R11O60927 126 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms