RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
GINS3-201ENST00000318129 ELP1O95163 1332 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 IRF6O14896 467 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 PPP1R11O60927 126 aaPredicted RBP11.49□□□□□ -0.57
GINS3-201ENST00000318129 ZBED4O75132 1171 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 ADCY7P51828 1080 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 CCZ1BP86790 482 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 CCZ1P86791 482 aaPredicted RBP11.49□□□□□ -0.57
GINS3-201ENST00000318129 FMR1Q06787 632 aaKnown RBP eCLIP11.49□□□□□ -0.57
GINS3-201ENST00000318129 COG2Q14746 738 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 NPY5RQ15761 445 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 RILPL1Q5EBL4 403 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 MCTP2Q6DN12 878 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 CATSPERGQ6ZRH7 1159 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 CKAP2LQ8IYA6 745 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 LRRN4CLQ8ND94 238 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 RIC8AQ9NPQ8 531 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 TRMT1Q9NXH9 659 aaKnown RBP11.49□□□□□ -0.57
GINS3-201ENST00000318129 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 TRPM7Q96QT4 1865 aa11.49□□□□□ -0.57
GINS3-201ENST00000318129 ZNF165P49910 485 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 SNAPC2Q13487 334 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 SARM1Q6SZW1 724 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 CNKSR2Q8WXI2 1034 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 CUL5Q93034 780 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 TNMDQ9H2S6 317 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 FBXO28Q9NVF7 368 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
GINS3-201ENST00000318129 DSG3P32926 999 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 TRAPPC10P48553 1259 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 GPS2Q13227 327 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 NR5A1Q13285 461 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 PABPC4Q13310 644 aaKnown RBP eCLIP11.48□□□□□ -0.57
GINS3-201ENST00000318129 ARHGAP29Q52LW3 1261 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 FAM173BQ6P4H8 233 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 KRT25Q7Z3Z0 450 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 SRLQ86TD4 932 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 SMC1BQ8NDV3 1235 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 TNFRSF25Q93038 417 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 MRFAP1L1Q96HT8 127 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 NCAPGQ9BPX3 1015 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 PSTPIP2Q9H939 334 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 SLC38A10Q9HBR0 1119 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 POLR3EQ9NVU0 708 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 RTEL1Q9NZ71 1219 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 CWC15Q9P013 229 aaKnown RBP11.48□□□□□ -0.57
GINS3-201ENST00000318129 MRPL11Q9Y3B7 192 aaKnown RBP11.48□□□□□ -0.57
GINS3-201ENST00000318129 MYH15Q9Y2K3 1946 aa11.48□□□□□ -0.57
GINS3-201ENST00000318129 PTPRFP10586 1907 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 CCDC194A0A1B0GVG4 234 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 M0R2N6 131 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 ATP8B1O43520 1251 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 ICAM1P05362 532 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 DGKZQ13574 1117 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 CST9Q5W186 159 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 TMCO3Q6UWJ1 677 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 FILIP1Q7Z7B0 1213 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 REXO1Q8N1G1 1221 aaKnown RBP11.47□□□□□ -0.57
GINS3-201ENST00000318129 WNK4Q96J92 1243 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 SPATA32Q96LK8 384 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 TFIP11Q9UBB9 837 aaKnown RBP11.47□□□□□ -0.57
GINS3-201ENST00000318129 PCDHA6Q9UN73 950 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 PCDHA8Q9Y5H6 950 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 ABCB11O95342 1321 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 GTF2A2P52657 109 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 OAZ1P54368 228 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 SNAP25P60880 206 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 CCDC174Q6PII3 467 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 SAMD1Q6SPF0 538 aaPredicted RBP11.47□□□□□ -0.57
GINS3-201ENST00000318129 MYCBPQ99417 103 aaPredicted RBP11.47□□□□□ -0.57
GINS3-201ENST00000318129 DACT1Q9NYF0 836 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 RCOR1Q9UKL0 485 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
GINS3-201ENST00000318129 VWA5AO00534 786 aa11.46□□□□□ -0.57
GINS3-201ENST00000318129 KIF3CO14782 793 aa11.46□□□□□ -0.57
GINS3-201ENST00000318129 ZBTB48P10074 688 aaPredicted RBP11.46□□□□□ -0.57
GINS3-201ENST00000318129 CETPP11597 493 aa11.46□□□□□ -0.57
GINS3-201ENST00000318129 ANO1Q5XXA6 986 aa11.46□□□□□ -0.57
GINS3-201ENST00000318129 GOLGA5Q8TBA6 731 aa11.46□□□□□ -0.57
GINS3-201ENST00000318129 USP28Q96RU2 1077 aa11.46□□□□□ -0.57
GINS3-201ENST00000318129 CEP131Q9UPN4 1083 aa11.46□□□□□ -0.57
GINS3-201ENST00000318129 AGTPBP1Q9UPW5 1226 aa11.46□□□□□ -0.57
GINS3-201ENST00000318129 RRP15Q9Y3B9 282 aaKnown RBP11.46□□□□□ -0.57
GINS3-201ENST00000318129 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.46□□□□□ -0.57
GINS3-201ENST00000318129 PASKQ96RG2 1323 aa11.46□□□□□ -0.57
GINS3-201ENST00000318129 LOC285556D6RIA3 1793 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 CLGNO14967 610 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 YEATS4O95619 227 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 CAVIN2O95810 425 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 BMP15O95972 392 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 OSBPP22059 807 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 USH1GQ495M9 461 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 REXO1L1PQ8IX06 675 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 SAMD3Q8N6K7 520 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 MB21D1Q8N884 522 aa11.46□□□□□ -0.58
GINS3-201ENST00000318129 IQUBQ8NA54 791 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms