RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 RASSF7Q02833 373 aa20.69■□□□□ 0.9
UBE2N-201ENST00000318066 PRPSAP1Q14558 356 aa20.69■□□□□ 0.9
UBE2N-201ENST00000318066 CLIC6Q96NY7 704 aa20.69■□□□□ 0.9
UBE2N-201ENST00000318066 KDM5AP29375 1690 aaKnown RBP20.69■□□□□ 0.9
UBE2N-201ENST00000318066 PLCB4Q15147 1175 aa20.69■□□□□ 0.9
UBE2N-201ENST00000318066 NXNQ6DKJ4 435 aa20.69■□□□□ 0.9
UBE2N-201ENST00000318066 LRGUKQ96M69 825 aa20.69■□□□□ 0.9
UBE2N-201ENST00000318066 WDR11Q9BZH6 1224 aa20.69■□□□□ 0.9
UBE2N-201ENST00000318066 FAF1Q9UNN5 650 aaPredicted RBP20.69■□□□□ 0.9
UBE2N-201ENST00000318066 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.69■□□□□ 0.9
UBE2N-201ENST00000318066 BSPRYQ5W0U4 402 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 DCAF15Q66K64 600 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 VSTM4Q8IW00 320 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 AMNQ9BXJ7 453 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 MRPL47Q9HD33 250 aaKnown RBP20.68■□□□□ 0.9
UBE2N-201ENST00000318066 SPATS2LQ9NUQ6 558 aaKnown RBP20.68■□□□□ 0.9
UBE2N-201ENST00000318066 SPTLC3Q9NUV7 552 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 SRGAP2BP0DMP2 458 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 GLE1Q53GS7 698 aaKnown RBP20.68■□□□□ 0.9
UBE2N-201ENST00000318066 ARHGEF16Q5VV41 709 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 ECEL1O95672 775 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 ZYXQ15942 572 aaKnown RBP20.68■□□□□ 0.9
UBE2N-201ENST00000318066 TRIM68Q6AZZ1 485 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 EDC3Q96F86 508 aaKnown RBP20.68■□□□□ 0.9
UBE2N-201ENST00000318066 GINS2Q9Y248 185 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 PDE8BO95263 885 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 TRIM4Q9C037 500 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 TMEM206Q9H813 350 aa20.68■□□□□ 0.9
UBE2N-201ENST00000318066 DIS3Q9Y2L1 958 aaKnown RBP20.68■□□□□ 0.9
UBE2N-201ENST00000318066 GSTA1P08263 222 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 GSTA2P09210 222 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 CUL1Q13616 776 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 TMTC3Q6ZXV5 915 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 ZC3H15Q8WU90 426 aaKnown RBP20.67■□□□□ 0.9
UBE2N-201ENST00000318066 IFNAR1P17181 557 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 CCNE1P24864 410 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 SCYL2Q6P3W7 929 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 TMED8Q6PL24 325 aaPredicted RBP20.67■□□□□ 0.9
UBE2N-201ENST00000318066 RASEFQ8IZ41 740 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 CACTINQ8WUQ7 758 aaKnown RBP20.67■□□□□ 0.9
UBE2N-201ENST00000318066 IFT88Q13099 833 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 LRCH2Q5VUJ6 765 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.67■□□□□ 0.9
UBE2N-201ENST00000318066 SUDS3Q9H7L9 328 aaPredicted RBP20.67■□□□□ 0.9
UBE2N-201ENST00000318066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.67■□□□□ 0.9
UBE2N-201ENST00000318066 RPAP1Q9BWH6 1393 aaPredicted RBP20.67■□□□□ 0.9
UBE2N-201ENST00000318066 NR2F2P24468 414 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 ESRRGP62508 458 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 KIF23Q02241 960 aaPredicted RBP20.67■□□□□ 0.9
UBE2N-201ENST00000318066 PPP4R3CPQ6ZMV5 832 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 MLXIPQ9HAP2 919 aa20.67■□□□□ 0.9
UBE2N-201ENST00000318066 NCKAP5LQ9HCH0 1330 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 A6NJR5 290 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 CCDC188H7C350 402 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 VPS41P49754 854 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 YWHAGP61981 247 aaKnown RBP eCLIP20.66■□□□□ 0.9
UBE2N-201ENST00000318066 TFDP1Q14186 410 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 ATP6V0A1Q93050 837 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 SCYL1Q96KG9 808 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 EPB41L5Q9HCM4 733 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 TMOD1P28289 359 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 STX1BP61266 288 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 PABPC4Q13310 644 aaKnown RBP eCLIP20.66■□□□□ 0.92e-7■■□□□ 11.4
UBE2N-201ENST00000318066 ALCAMQ13740 583 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 MMEL1Q495T6 779 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 FAM160B1Q5W0V3 765 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 IL17REQ8NFR9 667 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 TTLL3Q9Y4R7 772 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 SERPINB6P35237 376 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 PDE1BQ01064 536 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 RBL2Q08999 1139 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 ODR4Q5SWX8 454 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 KLHL29Q96CT2 875 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 SKIP12755 728 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 PHKG2P15735 406 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 PKP1Q13835 747 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 JADE1Q6IE81 842 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 SARM1Q6SZW1 724 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 NIM1KQ8IY84 436 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 BBS5Q8N3I7 341 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 FLAD1Q8NFF5 587 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
UBE2N-201ENST00000318066 TTI1O43156 1089 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 CERKLQ49MI3 558 aaPredicted RBP20.65■□□□□ 0.9
UBE2N-201ENST00000318066 ARL6IP4Q66PJ3 421 aaKnown RBP20.65■□□□□ 0.9
UBE2N-201ENST00000318066 TMC4Q7Z404 712 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 FGFR1OP2Q9NVK5 253 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 IPO5O00410 1097 aaKnown RBP20.65■□□□□ 0.9
UBE2N-201ENST00000318066 DPCR1Q3MIW9 517 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 SPC25Q9HBM1 224 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 H7C0C1 242 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 ATP5OP48047 213 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 PPP2R5CQ13362 524 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 RAB44Q7Z6P3 723 aaPredicted RBP20.65■□□□□ 0.9
UBE2N-201ENST00000318066 NEK9Q8TD19 979 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 SERPING1P05155 500 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 ICA1Q05084 483 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 SLFN13Q68D06 897 aa20.65■□□□□ 0.9
UBE2N-201ENST00000318066 DISP1Q96F81 1524 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms