RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 NEK8Q86SG6 692 aa17.55■□□□□ 0.4
PDLIM5-202ENST00000318007 CYP2W1Q8TAV3 490 aa17.55■□□□□ 0.4
PDLIM5-202ENST00000318007 GLT8D2Q9H1C3 349 aa17.55■□□□□ 0.4
PDLIM5-202ENST00000318007 MROH8Q9H579 483 aa17.55■□□□□ 0.4
PDLIM5-202ENST00000318007 ZCCHC17Q9NP64 241 aaKnown RBP17.55■□□□□ 0.4
PDLIM5-202ENST00000318007 PNMA2Q9UL42 364 aa17.55■□□□□ 0.4
PDLIM5-202ENST00000318007 MYH7BA7E2Y1 1941 aa17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 POTEB2H3BUK9 544 aa17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 ADORA2AP29274 412 aa17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 CTGFP29279 349 aa17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 MARCKSP29966 332 aaPredicted RBP17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 KRT85P78386 507 aa17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 ARHGAP4P98171 946 aa17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 AP3B2Q13367 1082 aa17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 RILPL1Q5EBL4 403 aa17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 ASTN1O14525 1302 aa17.54■□□□□ 0.4
PDLIM5-202ENST00000318007 EEPD1Q7L9B9 569 aa17.53■□□□□ 0.4
PDLIM5-202ENST00000318007 SLC37A4O43826 429 aa17.53■□□□□ 0.4
PDLIM5-202ENST00000318007 EDIL3O43854 480 aa17.53■□□□□ 0.4
PDLIM5-202ENST00000318007 ZNF76P36508 570 aa17.53■□□□□ 0.4
PDLIM5-202ENST00000318007 POTEDQ86YR6 584 aa17.53■□□□□ 0.4
PDLIM5-202ENST00000318007 ZNF396Q96N95 335 aaPredicted RBP17.53■□□□□ 0.4
PDLIM5-202ENST00000318007 PXMP2Q9NR77 195 aa17.53■□□□□ 0.4
PDLIM5-202ENST00000318007 PKD2L1Q9P0L9 805 aa17.53■□□□□ 0.4
PDLIM5-202ENST00000318007 PLXNB2O15031 1838 aa17.53■□□□□ 0.4
PDLIM5-202ENST00000318007 CAP1Q01518 475 aa17.52■□□□□ 0.4
PDLIM5-202ENST00000318007 STK38Q15208 465 aa17.52■□□□□ 0.4
PDLIM5-202ENST00000318007 ANO1Q5XXA6 986 aa17.52■□□□□ 0.4
PDLIM5-202ENST00000318007 FAM177A1Q8N128 213 aaPredicted RBP17.52■□□□□ 0.4
PDLIM5-202ENST00000318007 SPATA32Q96LK8 384 aa17.52■□□□□ 0.4
PDLIM5-202ENST00000318007 LCTP09848 1927 aa17.52■□□□□ 0.39
PDLIM5-202ENST00000318007 PFASO15067 1338 aa17.52■□□□□ 0.39
PDLIM5-202ENST00000318007 FAM86B1E9PN63 330 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 TNPO2O14787 897 aaKnown RBP17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 FOSP01100 380 aaPredicted RBP17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 FAM86B2P0C5J1 330 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 SREBF1P36956 1147 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 PGM5Q15124 567 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 PRR16Q569H4 304 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 PLEKHH3Q7Z736 793 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 DPP9Q86TI2 863 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 SOWAHBA6NEL2 793 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 SORBS3O60504 671 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 COBLO75128 1261 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 MAPK4P31152 587 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 SHCBP1Q8NEM2 672 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 DDX25Q9UHL0 483 aaKnown RBP17.51■□□□□ 0.39
PDLIM5-202ENST00000318007 PRPF40AO75400 957 aaKnown RBP17.5■□□□□ 0.39
PDLIM5-202ENST00000318007 PSMC4P43686 418 aa17.5■□□□□ 0.39
PDLIM5-202ENST00000318007 PTGDRQ13258 359 aa17.5■□□□□ 0.39
PDLIM5-202ENST00000318007 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
PDLIM5-202ENST00000318007 PDCD2LQ9BRP1 358 aa17.5■□□□□ 0.39
PDLIM5-202ENST00000318007 TMEM60Q9H2L4 133 aa17.5■□□□□ 0.39
PDLIM5-202ENST00000318007 CFAP45Q9UL16 551 aa17.5■□□□□ 0.39
PDLIM5-202ENST00000318007 PTPREP23469 700 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 COPB2P35606 906 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 ME1P48163 572 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 ALDH5A1P51649 535 aaPredicted RBP17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 LACTBP83111 547 aaPredicted RBP17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 SPECC1Q5M775 1068 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 NSUN6Q8TEA1 469 aaKnown RBP17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 LEO1Q8WVC0 666 aaPredicted RBP17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 BEGAINQ9BUH8 593 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 WDR11Q9BZH6 1224 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 DOCK3Q8IZD9 2030 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 NEMFO60524 1076 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 NR3C2P08235 984 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 CYP2B6P20813 491 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 MRPS9P82933 396 aaKnown RBP17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 SP3Q02447 781 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 GRIN1Q05586 938 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 REM2Q8IYK8 340 aaPredicted RBP17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 LINC00301Q8NCQ3 95 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 CD99L2Q8TCZ2 262 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 TRIM47Q96LD4 638 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 EHMT1Q9H9B1 1298 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 POLR3EQ9NVU0 708 aa17.49■□□□□ 0.39
PDLIM5-202ENST00000318007 GHRHRQ02643 423 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 FAM133AQ8N9E0 248 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 CRYGNQ8WXF5 182 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 FGD4Q96M96 766 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 CLIC6Q96NY7 704 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 ZNFX1Q9P2E3 1918 aaKnown RBP17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 SPTLC2O15270 562 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 MARCH6O60337 910 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 TRAPPC10P48553 1259 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 GRB14Q14449 540 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 PTPAQ15257 358 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 NPLOC4Q8TAT6 608 aa17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 MAP3K20Q9NYL2 800 aaKnown RBP17.48■□□□□ 0.39
PDLIM5-202ENST00000318007 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
PDLIM5-202ENST00000318007 THSD7BQ9C0I4 1608 aa17.47■□□□□ 0.39
PDLIM5-202ENST00000318007 DNAJC25-GNG10A0A024R161 153 aa17.47■□□□□ 0.39
PDLIM5-202ENST00000318007 VWA3AA6NCI4 1184 aa17.47■□□□□ 0.39
PDLIM5-202ENST00000318007 ITGB5P18084 799 aa17.47■□□□□ 0.39
PDLIM5-202ENST00000318007 TXKP42681 527 aa17.47■□□□□ 0.39
PDLIM5-202ENST00000318007 CCL14Q16627 93 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms