RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 BMS1Q14692 1282 aaKnown RBP8.54□□□□□ -1.04
TRIM55-202ENST00000315962 CALCRLQ16602 461 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 CIAPIN1Q6FI81 312 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 PDXDC2PQ6P474 469 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 CCDC12Q8WUD4 166 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-202ENST00000315962 PSMD1Q99460 953 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 L2HGDHQ9H9P8 463 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 DISC1Q9NRI5 854 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 PKD2L1Q9P0L9 805 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 ANKRD65E5RJM6 399 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 TEX33O43247 280 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 MYO1BO43795 1136 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 FCER1AP12319 257 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 BMP3P12645 472 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 TXLNAP40222 546 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 TRAPPC10P48553 1259 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 NOVP48745 357 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 GMPSP49915 693 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 PMS1P54277 932 aaKnown RBP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 PRR16Q569H4 304 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 GPATCH4Q5T3I0 446 aaKnown RBP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 KRT25Q7Z3Z0 450 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 CABP7Q86V35 215 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 ZKSCAN4Q969J2 545 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 HINFPQ9BQA5 517 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 EHD4Q9H223 541 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 TBC1D7Q9P0N9 293 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 MYH1P12882 1939 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 CNTNAP1P78357 1384 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 NAV1Q8NEY1 1877 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 MEIS1O00470 390 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 NKRFO15226 690 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 PHACTR2O75167 634 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 IDEP14735 1019 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 TPM4P67936 248 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 ECM1Q16610 540 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 ARHGAP27Q6ZUM4 889 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 KCNK18Q7Z418 384 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 REXO1L1PQ8IX06 675 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 CUL5Q93034 780 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 ZNF341Q9BYN7 854 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 LRWD1Q9UFC0 647 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 DDX25Q9UHL0 483 aaKnown RBP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 PPP2R2CQ9Y2T4 447 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 SOWAHDA6NJG2 315 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 PEX10O60683 326 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 ABL1P00519 1130 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 INPP5BP32019 993 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 PRCPP42785 496 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 HDLBPQ00341 1268 aaKnown RBP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 MCM6Q14566 821 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 NBPF12Q5TAG4 269 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 GLIS3Q8NEA6 775 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 MTFR1LQ9H019 292 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 ZHX3Q9H4I2 956 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 PLEKHA4Q9H4M7 779 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 CNOT7Q9UIV1 285 aaKnown RBP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 PRR12Q9ULL5 1215 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 LRRC37AA6NMS7 1700 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 TNS1Q9HBL0 1735 aaKnown RBP8.53□□□□□ -1.04
TRIM55-202ENST00000315962 NRXN2Q9P2S2 1712 aa8.53□□□□□ -1.04
TRIM55-202ENST00000315962 MYH6P13533 1939 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 NRDCO43847 1150 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 TADA3O75528 432 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 RPN1P04843 607 aaKnown RBP8.52□□□□□ -1.05
TRIM55-202ENST00000315962 LONP1P36776 959 aaKnown RBP8.52□□□□□ -1.05
TRIM55-202ENST00000315962 MRPL12P52815 198 aaKnown RBP8.52□□□□□ -1.05
TRIM55-202ENST00000315962 CYP4A11Q02928 519 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 SPDYE2Q495Y8 402 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 FAM151AQ8WW52 585 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
TRIM55-202ENST00000315962 MMTAG2Q9BU76 263 aaKnown RBP8.52□□□□□ -1.05
TRIM55-202ENST00000315962 VPS16Q9H269 839 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 MRPL44Q9H9J2 332 aaKnown RBP8.52□□□□□ -1.05
TRIM55-202ENST00000315962 SLC39A2Q9NP94 309 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 NYAP2Q9P242 653 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 ZBTB21Q9ULJ3 1066 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 C10orf71Q711Q0 1435 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 NPHP3-ACAD11A0A0J9YXS1 232 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 CCDC66A2RUB6 948 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 PPP1R3GB7ZBB8 358 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 MEIS2O14770 477 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 CHMP2AO43633 222 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 ENTPD3O75355 529 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 BMP15O95972 392 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 LRRC41Q15345 812 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 ARL6IP4Q66PJ3 421 aaKnown RBP8.52□□□□□ -1.05
TRIM55-202ENST00000315962 FBXO11Q86XK2 927 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 HAS1Q92839 578 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 MRIQ9BWK5 157 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 BCAS3Q9H6U6 928 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 RIC8AQ9NPQ8 531 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 IMPACTQ9P2X3 320 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 PCDHA12Q9UN75 941 aa8.52□□□□□ -1.05
TRIM55-202ENST00000315962 LAMB1P07942 1786 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 MAST2Q6P0Q8 1798 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 TRIM66O15016 1216 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 TBC1D8O95759 1140 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 LMAN1P49257 510 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 STAT2P52630 851 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms