RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 GOLGA8FQ08AF8 430 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 GOLGA8DPQ0D2H9 430 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 SPECC1LQ69YQ0 1117 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 CCDC84Q86UT8 332 aaPredicted RBP20.62■□□□□ 0.89
CCDC43-201ENST00000315286 CDK5RAP3Q96JB5 506 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 SGIP1Q9BQI5 828 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 VCPKMTQ9H867 229 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 STK17AQ9UEE5 414 aa20.62■□□□□ 0.89
CCDC43-201ENST00000315286 UTRNP46939 3433 aa20.61■□□□□ 0.89
CCDC43-201ENST00000315286 TEX33O43247 280 aa20.61■□□□□ 0.89
CCDC43-201ENST00000315286 ASIC1P78348 528 aa20.61■□□□□ 0.89
CCDC43-201ENST00000315286 MCM6Q14566 821 aa20.61■□□□□ 0.89
CCDC43-201ENST00000315286 SV2BQ7L1I2 683 aa20.61■□□□□ 0.89
CCDC43-201ENST00000315286 C16orf45Q96MC5 204 aaPredicted RBP20.61■□□□□ 0.89
CCDC43-201ENST00000315286 MBOAT7Q96N66 472 aa20.61■□□□□ 0.89
CCDC43-201ENST00000315286 ADD3Q9UEY8 706 aaKnown RBP20.61■□□□□ 0.89
CCDC43-201ENST00000315286 CD2APQ9Y5K6 639 aa20.61■□□□□ 0.89
CCDC43-201ENST00000315286 RASSF7Q02833 373 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 ECM1Q16610 540 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 MCTP2Q6DN12 878 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 KCNMB3Q9NPA1 279 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 TRIM49BA6NDI0 452 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 SPDYE3A6NKU9 549 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 ASNSP08243 561 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 RPS12P25398 132 aaKnown RBP20.6■□□□□ 0.89
CCDC43-201ENST00000315286 HOXA13P31271 388 aaPredicted RBP20.6■□□□□ 0.89
CCDC43-201ENST00000315286 PRELPP51888 382 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 PMS1P54277 932 aaKnown RBP20.6■□□□□ 0.89
CCDC43-201ENST00000315286 PDE4DQ08499 809 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 MOXD1Q6UVY6 613 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 KCNK18Q7Z418 384 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 LARP4BQ92615 738 aaKnown RBP20.6■□□□□ 0.89
CCDC43-201ENST00000315286 KIFC2Q96AC6 838 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 TEPSINQ96N21 525 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 CTAGE1Q96RT6 745 aa20.6■□□□□ 0.89
CCDC43-201ENST00000315286 MYMKA6NI61 221 aa20.59■□□□□ 0.89
CCDC43-201ENST00000315286 PHF20L1A8MW92 1017 aa20.59■□□□□ 0.89
CCDC43-201ENST00000315286 FOSP01100 380 aaPredicted RBP20.59■□□□□ 0.89
CCDC43-201ENST00000315286 TMEM119Q4V9L6 283 aa20.59■□□□□ 0.89
CCDC43-201ENST00000315286 CCAR2Q8N163 923 aaKnown RBP20.59■□□□□ 0.89
CCDC43-201ENST00000315286 CHURC1Q8WUH1 139 aa20.59■□□□□ 0.89
CCDC43-201ENST00000315286 RAD54LQ92698 747 aa20.59■□□□□ 0.89
CCDC43-201ENST00000315286 CCDC47Q96A33 483 aaKnown RBP20.59■□□□□ 0.89
CCDC43-201ENST00000315286 TMX1Q9H3N1 280 aa20.59■□□□□ 0.89
CCDC43-201ENST00000315286 EXOC1Q9NV70 894 aa20.59■□□□□ 0.89
CCDC43-201ENST00000315286 TRMT1Q9NXH9 659 aaKnown RBP20.59■□□□□ 0.89
CCDC43-201ENST00000315286 SREBF1P36956 1147 aa20.58■□□□□ 0.89
CCDC43-201ENST00000315286 GMPSP49915 693 aaPredicted RBP20.58■□□□□ 0.89
CCDC43-201ENST00000315286 STK4Q13043 487 aa20.58■□□□□ 0.89
CCDC43-201ENST00000315286 CCDC174Q6PII3 467 aa20.58■□□□□ 0.89
CCDC43-201ENST00000315286 SAMD7Q7Z3H4 446 aa20.58■□□□□ 0.89
CCDC43-201ENST00000315286 SH2D4AQ9H788 454 aa20.58■□□□□ 0.89
CCDC43-201ENST00000315286 LIMA1Q9UHB6 759 aaKnown RBP20.58■□□□□ 0.89
CCDC43-201ENST00000315286 LRRC10BA6NIK2 292 aa20.58■□□□□ 0.88
CCDC43-201ENST00000315286 H7C1D1 291 aa20.58■□□□□ 0.88
CCDC43-201ENST00000315286 STIM1Q13586 685 aa20.58■□□□□ 0.88
CCDC43-201ENST00000315286 KRT31Q15323 416 aa20.58■□□□□ 0.88
CCDC43-201ENST00000315286 PRR16Q569H4 304 aa20.58■□□□□ 0.88
CCDC43-201ENST00000315286 E4F1Q66K89 784 aaPredicted RBP20.58■□□□□ 0.88
CCDC43-201ENST00000315286 MICALL2Q8IY33 904 aa20.58■□□□□ 0.88
CCDC43-201ENST00000315286 RANBP17Q9H2T7 1088 aaKnown RBP20.58■□□□□ 0.88
CCDC43-201ENST00000315286 KCND1Q9NSA2 647 aa20.58■□□□□ 0.88
CCDC43-201ENST00000315286 GJA3Q9Y6H8 435 aa20.58■□□□□ 0.88
CCDC43-201ENST00000315286 ASTN2O75129 1339 aaPredicted RBP20.58■□□□□ 0.88
CCDC43-201ENST00000315286 PIK3CDO00329 1044 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 PSMA7O14818 248 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 NRDCO43847 1150 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 FCER1AP12319 257 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 FILIP1LQ4L180 1135 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 ATAD5Q96QE3 1844 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 LTBP3Q9NS15 1303 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 PLA2G6O60733 806 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 TNNT1P13805 278 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 CCT6AP40227 531 aaKnown RBP20.57■□□□□ 0.88
CCDC43-201ENST00000315286 PBX1P40424 430 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 TNFAIP1Q13829 316 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 TBC1D10BQ4KMP7 808 aaPredicted RBP20.57■□□□□ 0.88
CCDC43-201ENST00000315286 TCP11X2Q5H9J9 407 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 IRF2BP1Q8IU81 584 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 TBC1D5Q92609 795 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 HPS3Q969F9 1004 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 PRIMPOLQ96LW4 560 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 FBXO28Q9NVF7 368 aa20.57■□□□□ 0.88
CCDC43-201ENST00000315286 CNOT7Q9UIV1 285 aaKnown RBP20.57■□□□□ 0.88
CCDC43-201ENST00000315286 KCNJ18B7U540 433 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 FAM86B1E9PN63 330 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 FZD9O00144 591 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 TPM2P07951 284 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 FAM86B2P0C5J1 330 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 SPAG1Q07617 926 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 TRAF1Q13077 416 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 KCNJ12Q14500 433 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 Q4G0T1 1027 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 SAMD1Q6SPF0 538 aaPredicted RBP20.56■□□□□ 0.88
CCDC43-201ENST00000315286 DYMQ7RTS9 669 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 SLFN12Q8IYM2 578 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 TC2NQ8N9U0 490 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 CCDC112Q8NEF3 446 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 ETNPPLQ8TBG4 499 aa20.56■□□□□ 0.88
CCDC43-201ENST00000315286 LENG9Q96B70 501 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms