RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 UTP11Q9Y3A2 253 aaKnown RBP14.82□□□□□ -0.04
RFFL-201ENST00000315249 GNAT1P11488 350 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 STXBP2Q15833 593 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 PTPRMP28827 1452 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 FCER1AP12319 257 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 ZNF827Q17R98 1081 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 PTPROQ16827 1216 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 CBX8Q9HC52 389 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 PFDN4Q9NQP4 134 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 E9PCH4 1651 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 TNPO2O14787 897 aaKnown RBP14.81□□□□□ -0.04
RFFL-201ENST00000315249 FEM1BQ9UK73 627 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 TTC30AQ86WT1 665 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 NXF1Q9UBU9 619 aaKnown RBP14.81□□□□□ -0.04
RFFL-201ENST00000315249 PTCH1Q13635 1447 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 KCNJ18B7U540 433 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 N4BP1O75113 896 aaKnown RBP14.81□□□□□ -0.04
RFFL-201ENST00000315249 KCNJ12Q14500 433 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 C6orf163Q5TEZ5 329 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 FASTKD5Q7L8L6 764 aaKnown RBP14.81□□□□□ -0.04
RFFL-201ENST00000315249 STAP2Q9UGK3 403 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 XRCC6P12956 609 aaKnown RBP eCLIP14.81□□□□□ -0.04
RFFL-201ENST00000315249 PTPREP23469 700 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 MTX1Q13505 466 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 DNAJC21Q5F1R6 531 aaKnown RBP14.81□□□□□ -0.04
RFFL-201ENST00000315249 PEX26Q7Z412 305 aa14.81□□□□□ -0.04
RFFL-201ENST00000315249 CACTINQ8WUQ7 758 aaKnown RBP14.81□□□□□ -0.04
RFFL-201ENST00000315249 CLIC2O15247 247 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 CEP104O60308 925 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 MROH7-TTC4A0A0A0MT08 1334 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 NME8Q8N427 588 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 LARP4BQ92615 738 aaKnown RBP14.8□□□□□ -0.04
RFFL-201ENST00000315249 TRIM7Q9C029 511 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 CPVLQ9H3G5 476 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 DAAM2Q86T65 1068 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 GCNAQ96QF7 691 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 MTMR1Q13613 665 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 PRR5LQ6MZQ0 368 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 IQSEC2Q5JU85 1478 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 NR5A1Q13285 461 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 KCNH4Q9UQ05 1017 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 DENND3A2RUS2 1198 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 ZNF853P0CG23 659 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 DPEP1P16444 411 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 RSAD2Q8WXG1 361 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 FAM149B1Q96BN6 582 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 CEP95Q96GE4 821 aa14.8□□□□□ -0.04
RFFL-201ENST00000315249 TAF1CQ15572 869 aaPredicted RBP14.79□□□□□ -0.04
RFFL-201ENST00000315249 ANGEL2Q5VTE6 544 aaKnown RBP14.79□□□□□ -0.04
RFFL-201ENST00000315249 CATSPER4Q7RTX7 472 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 DCAF4Q8WV16 495 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 SPATA31A5Q5VU36 1347 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 SPATA31A7Q8IWB4 1347 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 PLEKHG2Q9H7P9 1386 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 GCFC2P16383 781 aaKnown RBP14.79□□□□□ -0.04
RFFL-201ENST00000315249 AFG3L2Q9Y4W6 797 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 SSH2Q76I76 1423 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 CDC25AP30304 524 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 CTTNQ14247 550 aaKnown RBP14.79□□□□□ -0.04
RFFL-201ENST00000315249 FBF1Q8TES7 1133 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 SECISBP2LQ93073 1101 aaKnown RBP14.79□□□□□ -0.04
RFFL-201ENST00000315249 MXD3Q9BW11 206 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 RPAP3Q9H6T3 665 aaPredicted RBP14.79□□□□□ -0.04
RFFL-201ENST00000315249 SH2B2O14492 632 aaPredicted RBP14.79□□□□□ -0.04
RFFL-201ENST00000315249 XPAP23025 273 aaPredicted RBP14.79□□□□□ -0.04
RFFL-201ENST00000315249 HMGCS2P54868 508 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 MYL7Q01449 175 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 LRRC41Q15345 812 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 CCDC105Q8IYK2 499 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 FOXP1Q9H334 677 aaPredicted RBP14.79□□□□□ -0.04
RFFL-201ENST00000315249 FBXO40Q9UH90 709 aa14.79□□□□□ -0.04
RFFL-201ENST00000315249 POLR2FP61218 127 aaKnown RBP14.78□□□□□ -0.04
RFFL-201ENST00000315249 ATRIPQ8WXE1 791 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 ACCSQ96QU6 501 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 NSRP1Q9H0G5 558 aaKnown RBP14.78□□□□□ -0.04
RFFL-201ENST00000315249 RNF146Q9NTX7 359 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 DSTYKQ6XUX3 929 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 RASEFQ8IZ41 740 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 FBXO18Q8NFZ0 1043 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 STRBPQ96SI9 672 aaKnown RBP14.78□□□□□ -0.04
RFFL-201ENST00000315249 NMT2O60551 498 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 KAZNQ674X7 775 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 TRPM1Q7Z4N2 1603 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 UTYO14607 1347 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 K7ERI5 159 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 IFNB1P01574 187 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 NDUFA8P51970 172 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 HADHQ16836 314 aaKnown RBP14.78□□□□□ -0.04
RFFL-201ENST00000315249 TWF2Q6IBS0 349 aaKnown RBP14.78□□□□□ -0.04
RFFL-201ENST00000315249 TBC1D16Q8TBP0 767 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 OPA1O60313 960 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 PLEKHA8P1O95397 391 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 SCARF1Q14162 830 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 LAD1O00515 517 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 ACTN4O43707 911 aaKnown RBP14.78□□□□□ -0.04
RFFL-201ENST00000315249 CELF2O95319 508 aaKnown RBP14.78□□□□□ -0.04
RFFL-201ENST00000315249 RPF1Q9H9Y2 349 aaKnown RBP14.78□□□□□ -0.04
RFFL-201ENST00000315249 GGA3Q9NZ52 723 aa14.78□□□□□ -0.04
RFFL-201ENST00000315249 THAP12O43422 761 aa14.77□□□□□ -0.04
RFFL-201ENST00000315249 MAN1A1P33908 653 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms