RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 RUBCNQ92622 972 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 CEP89Q96ST8 783 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 MTMR7Q9Y216 660 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 TAF1P21675 1872 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 TCP1P17987 556 aaKnown RBP14.92□□□□□ -0.02
SKA3-202ENST00000314759 ERFEQ4G0M1 354 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 VWA3BQ502W6 1294 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 CENPPQ6IPU0 288 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 GALNT17Q6IS24 598 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 ARL8AQ96BM9 186 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 FAM107BQ9H098 131 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 NDST4Q9H3R1 872 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 SLC39A2Q9NP94 309 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 HYOU1Q9Y4L1 999 aa14.92□□□□□ -0.02
SKA3-202ENST00000314759 USP17L3A6NCW0 530 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 USP17L4A6NCW7 530 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 GOLGA8KD6RF30 607 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 NCK2O43639 380 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 OR52Z1P0C646 297 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 LETM2Q2VYF4 491 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 USP17L1Q7RTZ2 530 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 ANKRD13CQ8N6S4 541 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 DYNLL2Q96FJ2 89 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 MMTAG2Q9BU76 263 aaKnown RBP14.91□□□□□ -0.02
SKA3-202ENST00000314759 STIM2Q9P246 746 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 AKR1B10O60218 316 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 CCNT1O60563 726 aaKnown RBP14.91□□□□□ -0.02
SKA3-202ENST00000314759 PPP1R2P41236 205 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 TECP42680 631 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 GNAQP50148 359 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 EPHB4P54760 987 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 TTMPQ5BVD1 217 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 CNNM4Q6P4Q7 775 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 ANKS1AQ92625 1134 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 CELF1Q92879 486 aaKnown RBP14.91□□□□□ -0.02
SKA3-202ENST00000314759 IQCDQ96DY2 449 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 MMRN2Q9H8L6 949 aa14.91□□□□□ -0.02
SKA3-202ENST00000314759 XIRP1Q702N8 1843 aaKnown RBP14.91□□□□□ -0.02
SKA3-202ENST00000314759 LRRC53A6NM62 1247 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 INPP5BP32019 993 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 GSCP56915 257 aaPredicted RBP14.9□□□□□ -0.02
SKA3-202ENST00000314759 ITPK1Q13572 414 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 COBLL1Q53SF7 1204 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 CCDC181Q5TID7 509 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 EMBQ6PCB8 327 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 GBP6Q6ZN66 633 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 CCDC91Q7Z6B0 441 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 ALS2CR12Q96Q35 445 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 TFCP2L1Q9NZI6 479 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 A0A0G2JS52 829 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 OPA1O60313 960 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 EPB41P11171 864 aaKnown RBP14.9□□□□□ -0.02
SKA3-202ENST00000314759 SF3B3Q15393 1217 aaKnown RBP14.9□□□□□ -0.02
SKA3-202ENST00000314759 RRAGAQ7L523 313 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 TLR10Q9BXR5 811 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 RBM12Q9NTZ6 932 aaKnown RBP14.9□□□□□ -0.02
SKA3-202ENST00000314759 JAG2Q9Y219 1238 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
SKA3-202ENST00000314759 GOLGA8HP0CJ92 632 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 MAGEA1P43355 309 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 AMPD3Q01432 767 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 PDCLQ13371 301 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 C12orf60Q5U649 245 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 CPVLQ9H3G5 476 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 LAMB1P07942 1786 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 KIAA1551Q9HCM1 1747 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 SHTN1A0MZ66 631 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 MYO1FO00160 1098 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 ATP2B2Q01814 1243 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 ALS2CLQ60I27 953 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 BAP1Q92560 729 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 CAVIN3Q969G5 261 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 MTMR8Q96EF0 704 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 ZMYND12Q9H0C1 365 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 PALM3A6NDB9 673 aaPredicted RBP14.89□□□□□ -0.03
SKA3-202ENST00000314759 ERCC3P19447 782 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 GFPT1Q06210 699 aaPredicted RBP14.89□□□□□ -0.03
SKA3-202ENST00000314759 ASTE1Q2TB18 679 aaPredicted RBP14.89□□□□□ -0.03
SKA3-202ENST00000314759 SH2D3CQ8N5H7 860 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 MS4A14Q96JA4 679 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 CAPN7Q9Y6W3 813 aa14.89□□□□□ -0.03
SKA3-202ENST00000314759 LAMB2P55268 1798 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 LOC102724428A0A0B4J2F2 783 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 PJA2O43164 708 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 HIBADHP31937 336 aaKnown RBP14.88□□□□□ -0.03
SKA3-202ENST00000314759 PAFAH1B1P43034 410 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 SIK1P57059 783 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 RASSF7Q02833 373 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 MAN2A1Q16706 1144 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 KLHDC7AQ5VTJ3 777 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 C8orf74Q6P047 294 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 TMED8Q6PL24 325 aaPredicted RBP14.88□□□□□ -0.03
SKA3-202ENST00000314759 CCDC84Q86UT8 332 aaPredicted RBP14.88□□□□□ -0.03
SKA3-202ENST00000314759 CXorf56Q9H5V9 222 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 MYH1P12882 1939 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 MYMKA6NI61 221 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 BUB1O43683 1085 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 HSF2BPO75031 334 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 TNFRSF8P28908 595 aa14.88□□□□□ -0.03
SKA3-202ENST00000314759 ATP1A2P50993 1020 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms