RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 EPSTI1Q96J88 318 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
EBF1-201ENST00000313708 FAM200BP0CF97 657 aa13.46□□□□□ -0.25
EBF1-201ENST00000313708 RFC5P40937 340 aa13.46□□□□□ -0.25
EBF1-201ENST00000313708 VPS41P49754 854 aa13.46□□□□□ -0.25
EBF1-201ENST00000313708 RAB27AP51159 221 aa13.46□□□□□ -0.25
EBF1-201ENST00000313708 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
EBF1-201ENST00000313708 CARD9Q9H257 536 aa13.46□□□□□ -0.25
EBF1-201ENST00000313708 EEF1GP26641 437 aaKnown RBP13.46□□□□□ -0.25
EBF1-201ENST00000313708 CDC27P30260 824 aa13.46□□□□□ -0.25
EBF1-201ENST00000313708 HSP90AA5PQ58FG0 334 aa13.46□□□□□ -0.25
EBF1-201ENST00000313708 LRIG3Q6UXM1 1119 aa13.46□□□□□ -0.25
EBF1-201ENST00000313708 CYTH2Q99418 400 aa13.46□□□□□ -0.25
EBF1-201ENST00000313708 GTPBP6O43824 516 aaPredicted RBP13.46□□□□□ -0.26
EBF1-201ENST00000313708 PALMO75781 387 aa13.46□□□□□ -0.26
EBF1-201ENST00000313708 RASSF9O75901 435 aa13.46□□□□□ -0.26
EBF1-201ENST00000313708 ZFXP17010 805 aaPredicted RBP13.46□□□□□ -0.26
EBF1-201ENST00000313708 PACSIN2Q9UNF0 486 aaPredicted RBP13.46□□□□□ -0.26
EBF1-201ENST00000313708 RTN3O95197 1032 aaPredicted RBP13.46□□□□□ -0.26
EBF1-201ENST00000313708 SLC44A4Q53GD3 710 aa13.46□□□□□ -0.26
EBF1-201ENST00000313708 DTHD1Q6ZMT9 781 aa13.46□□□□□ -0.26
EBF1-201ENST00000313708 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.26
EBF1-201ENST00000313708 LCA5Q86VQ0 697 aa13.46□□□□□ -0.26
EBF1-201ENST00000313708 PROCA1Q8NCQ7 364 aaPredicted RBP13.46□□□□□ -0.26
EBF1-201ENST00000313708 SLC17A8Q8NDX2 589 aa13.46□□□□□ -0.26
EBF1-201ENST00000313708 hCG_1642624A0A1W2PR95 340 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 PGRMC1O00264 195 aaKnown RBP13.45□□□□□ -0.26
EBF1-201ENST00000313708 WASLO00401 505 aaPredicted RBP13.45□□□□□ -0.26
EBF1-201ENST00000313708 RASGRF2O14827 1237 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 METTL24Q5JXM2 366 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 PCDHB6Q9Y5E3 794 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 SERPINB3P29508 390 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 RFC1P35251 1148 aaPredicted RBP13.45□□□□□ -0.26
EBF1-201ENST00000313708 COPS2P61201 443 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 CCDC105Q8IYK2 499 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 MAGEC3Q8TD91 643 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 UBN2Q6ZU65 1347 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 PAPD7Q5XG87 772 aaKnown RBP13.45□□□□□ -0.26
EBF1-201ENST00000313708 LMBR1LQ6UX01 489 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 MIER3Q7Z3K6 550 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 OLFM3Q96PB7 478 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 MIS12Q9H081 205 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 TMBIM4Q9HC24 238 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 ABCC10Q5T3U5 1492 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 ABCC1P33527 1531 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 RAD21O60216 631 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 SUPT3HO75486 399 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 EPB41P11171 864 aaKnown RBP13.45□□□□□ -0.26
EBF1-201ENST00000313708 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
EBF1-201ENST00000313708 LRRC34Q8IZ02 419 aa13.45□□□□□ -0.26
EBF1-201ENST00000313708 USP15Q9Y4E8 981 aaPredicted RBP13.45□□□□□ -0.26
EBF1-201ENST00000313708 CPSF1Q10570 1443 aaKnown RBP13.45□□□□□ -0.26
EBF1-201ENST00000313708 CTDNEP1O95476 244 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 GSTA1P08263 222 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 GRIK3Q13003 919 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 Q4G0T1 1027 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 KCNB2Q92953 911 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 LRRIQ1Q96JM4 1722 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 TRIM49BA6NDI0 452 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 TCP11X1B4DZS4 312 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 TROVE2P10155 538 aaKnown RBP eCLIP13.44□□□□□ -0.26
EBF1-201ENST00000313708 KRT15P19012 456 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 C6orf118Q5T5N4 469 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 SEL1L2Q5TEA6 688 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 CRELD2Q6UXH1 353 aaPredicted RBP13.44□□□□□ -0.26
EBF1-201ENST00000313708 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 MTRQ99707 1265 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 RNF41Q9H4P4 317 aaPredicted RBP13.44□□□□□ -0.26
EBF1-201ENST00000313708 MTUS1Q9ULD2 1270 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 YTHDC2Q9H6S0 1430 aaKnown RBP13.44□□□□□ -0.26
EBF1-201ENST00000313708 UBOX5O94941 541 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 ERICH1Q86X53 443 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
EBF1-201ENST00000313708 DTX3LQ8TDB6 740 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
EBF1-201ENST00000313708 CCDC87Q9NVE4 849 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 ASIC3Q9UHC3 531 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 GNAT2P19087 354 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 HSD17B3P37058 310 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 ALDH5A1P51649 535 aaPredicted RBP13.44□□□□□ -0.26
EBF1-201ENST00000313708 IL9RQ01113 521 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 ZBTB17Q13105 803 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 HAUS3Q68CZ6 603 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
EBF1-201ENST00000313708 ITIH6Q6UXX5 1313 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 TRAF5O00463 557 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 ORC4O43929 436 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 POLD1P28340 1107 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 ZNF658Q5TYW1 1059 aaPredicted RBP13.43□□□□□ -0.26
EBF1-201ENST00000313708 TMEM139Q8IV31 216 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 RPS6KC1Q96S38 1066 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 PITPNM3Q9BZ71 974 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 DDX47Q9H0S4 455 aaKnown RBP13.43□□□□□ -0.26
EBF1-201ENST00000313708 STRN4Q9NRL3 753 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 PARP2Q9UGN5 583 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 ANGPTL2Q9UKU9 493 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 DUSP10Q9Y6W6 482 aa13.43□□□□□ -0.26
EBF1-201ENST00000313708 LRRC7Q96NW7 1537 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms