RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SYNRGQ9UMZ2 1314 aa13.92□□□□□ -0.18
SCFD1-201ENST00000311943 EPB41L2O43491 1005 aaKnown RBP13.91□□□□□ -0.18
SCFD1-201ENST00000311943 ADAMTS4O75173 837 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 MYCLP12524 364 aaPredicted RBP13.91□□□□□ -0.18
SCFD1-201ENST00000311943 EVCP57679 992 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 SEPT14Q6ZU15 432 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 UIMC1Q96RL1 719 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 PXMP2Q9NR77 195 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 RTEL1Q9NZ71 1219 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 CD2BP2O95400 341 aaKnown RBP13.91□□□□□ -0.18
SCFD1-201ENST00000311943 AKR1A1P14550 325 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 EDNRBP24530 442 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 ME3Q16798 604 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 LY6KQ17RY6 165 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 FBXL16Q8N461 479 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 SLC26A6Q9BXS9 759 aa13.91□□□□□ -0.18
SCFD1-201ENST00000311943 SEC63Q9UGP8 760 aaKnown RBP13.91□□□□□ -0.18
SCFD1-201ENST00000311943 STXBP3O00186 592 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 CTDNEP1O95476 244 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 COL6A1P12109 1028 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 LRRC26Q2I0M4 334 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 ARHGEF16Q5VV41 709 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 RASGRP4Q8TDF6 673 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 MORC4Q8TE76 937 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 FAM184BQ9ULE4 1060 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 GNEQ9Y223 722 aaKnown RBP13.9□□□□□ -0.18
SCFD1-201ENST00000311943 ASB14A6NK59 587 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 GCOM1H8Y6P7 765 aaPredicted RBP13.9□□□□□ -0.18
SCFD1-201ENST00000311943 DYNC1LI2O43237 492 aaPredicted RBP13.9□□□□□ -0.18
SCFD1-201ENST00000311943 NR3C2P08235 984 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 C6orf222P0C671 652 aaPredicted RBP13.9□□□□□ -0.18
SCFD1-201ENST00000311943 POLR2MP0CAP2 368 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 RARBP10826 455 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 GNAQP50148 359 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 MRPS9P82933 396 aaKnown RBP13.9□□□□□ -0.18
SCFD1-201ENST00000311943 TNFAIP2Q03169 654 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 PDE4DQ08499 809 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 DPF3Q92784 378 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 C22orf23Q9BZE7 217 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 RBM28Q9NW13 759 aaKnown RBP13.9□□□□□ -0.18
SCFD1-201ENST00000311943 VPS54Q9P1Q0 977 aa13.9□□□□□ -0.18
SCFD1-201ENST00000311943 SYN1P17600 705 aa13.89□□□□□ -0.19
SCFD1-201ENST00000311943 SMARCA1P28370 1054 aa13.89□□□□□ -0.19
SCFD1-201ENST00000311943 SP2Q02086 613 aa13.89□□□□□ -0.19
SCFD1-201ENST00000311943 PGM5Q15124 567 aa13.89□□□□□ -0.19
SCFD1-201ENST00000311943 RGS22Q8NE09 1264 aa13.89□□□□□ -0.19
SCFD1-201ENST00000311943 WDR11Q9BZH6 1224 aa13.89□□□□□ -0.19
SCFD1-201ENST00000311943 C11orf49Q9H6J7 331 aa13.89□□□□□ -0.19
SCFD1-201ENST00000311943 SZT2Q5T011 3432 aa13.89□□□□□ -0.19
SCFD1-201ENST00000311943 FOSBP53539 338 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 NAPAP54920 295 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 ANAPC15P60006 121 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 KCNA10Q16322 511 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 CCSAPQ6IQ19 270 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-201ENST00000311943 MCF2L2Q86YR7 1114 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 LZTS2Q9BRK4 669 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 PSTPIP2Q9H939 334 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 ADD3Q9UEY8 706 aaKnown RBP13.88□□□□□ -0.19
SCFD1-201ENST00000311943 CEP290O15078 2479 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 JAK2O60674 1132 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 GHRHRQ02643 423 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 NECAB2Q7Z6G3 386 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 MSL3Q8N5Y2 521 aaKnown RBP13.88□□□□□ -0.19
SCFD1-201ENST00000311943 DNERQ8NFT8 737 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 CYP2W1Q8TAV3 490 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 NSUN6Q8TEA1 469 aaKnown RBP13.88□□□□□ -0.19
SCFD1-201ENST00000311943 IL17RAQ96F46 866 aa13.88□□□□□ -0.19
SCFD1-201ENST00000311943 NID2Q14112 1375 aa13.87□□□□□ -0.19
SCFD1-201ENST00000311943 PSMC6P62333 389 aa13.87□□□□□ -0.19
SCFD1-201ENST00000311943 PFKFB3Q16875 520 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-201ENST00000311943 CXCL17Q6UXB2 119 aa13.87□□□□□ -0.19
SCFD1-201ENST00000311943 TLK2Q86UE8 772 aa13.87□□□□□ -0.19
SCFD1-201ENST00000311943 KLHDC9Q8NEP7 349 aa13.87□□□□□ -0.19
SCFD1-201ENST00000311943 SMARCC2Q8TAQ2 1214 aa13.87□□□□□ -0.19
SCFD1-201ENST00000311943 SMCO2A6NFE2 343 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 H0YGN5 161 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 DNM1LO00429 736 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 DUSP11O75319 330 aaKnown RBP13.86□□□□□ -0.19
SCFD1-201ENST00000311943 ASGR1P07306 291 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 TXNP10599 105 aaKnown RBP13.86□□□□□ -0.19
SCFD1-201ENST00000311943 SCG2P13521 617 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 SEMA3FQ13275 785 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 GNASQ5JWF2 1037 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 JAKMIP3Q5VZ66 844 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 CCDC62Q6P9F0 684 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 C7orf61Q8IZ16 206 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 ZNF274Q96GC6 653 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-201ENST00000311943 BARHL2Q9NY43 387 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 PKD2L1Q9P0L9 805 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 ZMYND8Q9ULU4 1186 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-201ENST00000311943 DOCK5Q9H7D0 1870 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
SCFD1-201ENST00000311943 MSCO60682 206 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
SCFD1-201ENST00000311943 IFNAR1P17181 557 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 VSIG10LQ86VR7 867 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 SLKQ9H2G2 1235 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-201ENST00000311943 PCDHA6Q9UN73 950 aa13.86□□□□□ -0.19
SCFD1-201ENST00000311943 KCNJ14Q9UNX9 436 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms