RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 PABPC4Q13310 644 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 PDIA5Q14554 519 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 POSTNQ15063 836 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 ANO6Q4KMQ2 910 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 FCHSD1Q86WN1 690 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 SMARCE1Q969G3 411 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 CUEDC2Q9H467 287 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 ELP3Q9H9T3 547 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 LRWD1Q9UFC0 647 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 SERTAD1Q9UHV2 236 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 PASKQ96RG2 1323 aa12.86□□□□□ -0.35
CTDSPL-202ENST00000310189 CYP3A7-CYP3A51PA0A087WV96 503 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 BECN2A8MW95 431 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 CXCL11O14625 94 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 TDP2O95551 362 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 CYP3A7P24462 503 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 ZNF165P49910 485 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 FSTL1Q12841 308 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 TKFCQ3LXA3 575 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 KRT79Q5XKE5 535 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 CABP7Q86V35 215 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 PROCA1Q8NCQ7 364 aaPredicted RBP12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 CCDC47Q96A33 483 aaKnown RBP12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 CLMNQ96JQ2 1002 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 FUCA2Q9BTY2 467 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 CCSER1Q9C0I3 900 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 MAF1Q9H063 256 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 TMEM60Q9H2L4 133 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 MAGEF1Q9HAY2 307 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 PCDHA12Q9UN75 941 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 VWA5AO00534 786 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 TBX3O15119 743 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 SLC26A4O43511 780 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 DSG3P32926 999 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 TECP42680 631 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 NLRP12P59046 1061 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 AMPD3Q01432 767 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 LDLRAD1Q5T700 205 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 CST9Q5W186 159 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 GADL1Q6ZQY3 521 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 CATSPERGQ6ZRH7 1159 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 AGBL1Q96MI9 1066 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 LRRC27Q9C0I9 530 aa12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 RAVER2Q9HCJ3 691 aaKnown RBP12.85□□□□□ -0.35
CTDSPL-202ENST00000310189 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 SMTNL1A8MU46 457 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 MYL1P05976 194 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 CYP3A4P08684 503 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 IRX3P78415 501 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 CCDC173Q0VFZ6 552 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 PPIL2Q13356 520 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 PNOCQ13519 176 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 Q4G0T1 1027 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 MB21D1Q8N884 522 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 TRIML1Q8N9V2 468 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 SLC10A4Q96EP9 437 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 FAM20AQ96MK3 541 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 TRERF1Q96PN7 1200 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 MTMR9Q96QG7 549 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 TTC12Q9H892 705 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 DISC1Q9NRI5 854 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 RMND1Q9NWS8 449 aa12.84□□□□□ -0.35
CTDSPL-202ENST00000310189 OTOFQ9HC10 1997 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 ACTN4O43707 911 aaKnown RBP12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 HUNKP57058 714 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 IL17AQ16552 155 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 PRR16Q569H4 304 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 USP49Q70CQ1 688 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 OPTNQ96CV9 577 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 ATG4CQ96DT6 458 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 TEX13BQ9BXU2 312 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 GTPBP4Q9BZE4 634 aaKnown RBP12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 NT5C3AQ9H0P0 336 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 HOMER2Q9NSB8 354 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 TUBE1Q9UJT0 475 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 KDM3AQ9Y4C1 1321 aa12.83□□□□□ -0.36
CTDSPL-202ENST00000310189 BIN1O00499 593 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 SLC37A4O43826 429 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 OSBPP22059 807 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 CIITAP33076 1130 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 AFMP43652 599 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 HSD17B4P51659 736 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 SETQ01105 290 aaPredicted RBP12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 SEMA3FQ13275 785 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 DGKZQ13574 1117 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 PLS1Q14651 629 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 KARSQ15046 597 aaKnown RBP12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 HAUS3Q68CZ6 603 aa12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 SNRNP48Q6IEG0 339 aaKnown RBP12.82□□□□□ -0.36
CTDSPL-202ENST00000310189 RNF207Q6ZRF8 634 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms