RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 YIPF3Q9GZM5 350 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 ZC4H2Q9NQZ6 224 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 GEMIN8Q9NWZ8 242 aaKnown RBP10.21□□□□□ -0.78
XCR1-201ENST00000309285 PTPREP23469 700 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 ACTN3Q08043 901 aaPredicted RBP10.21□□□□□ -0.78
XCR1-201ENST00000309285 MUM1Q2TAK8 710 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 TMTC3Q6ZXV5 915 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 CCDC25Q86WR0 208 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 MTA3Q9BTC8 594 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 CTNND2Q9UQB3 1225 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 CHUKO15111 745 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 PLVAPQ9BX97 442 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 TSPYL2Q9H2G4 693 aaPredicted RBP10.2□□□□□ -0.78
XCR1-201ENST00000309285 USP40Q9NVE5 1235 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 SMCO2A6NFE2 343 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 ERCC3P19447 782 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 RANBP1P43487 201 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 FBXO33Q7Z6M2 555 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 LARGE2Q8N3Y3 721 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 ENGASEQ8NFI3 743 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 SREK1Q8WXA9 508 aaKnown RBP10.2□□□□□ -0.78
XCR1-201ENST00000309285 DDX12PQ92771 950 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 VPS16Q9H269 839 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 SSX2IPQ9Y2D8 614 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 SRPRBQ9Y5M8 271 aaKnown RBP10.2□□□□□ -0.78
XCR1-201ENST00000309285 SYNRGQ9UMZ2 1314 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 JCADQ9P266 1359 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 TXKP42681 527 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 SATB1Q01826 763 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 NONOQ15233 471 aaKnown RBP eCLIP10.2□□□□□ -0.78
XCR1-201ENST00000309285 RESP18Q5W5W9 173 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 LRRC47Q8N1G4 583 aaKnown RBP10.2□□□□□ -0.78
XCR1-201ENST00000309285 SLF1Q9BQI6 1058 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 CD209Q9NNX6 404 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 STK32BQ9NY57 414 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 NOD1Q9Y239 953 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 B4DLN1 442 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 MRPL12P52815 198 aaKnown RBP10.2□□□□□ -0.78
XCR1-201ENST00000309285 TNNC1P63316 161 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 IQCB1Q15051 598 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 DCAF17Q5H9S7 520 aaPredicted RBP10.2□□□□□ -0.78
XCR1-201ENST00000309285 MAEAQ7L5Y9 396 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 TXNRD3Q86VQ6 643 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 KIAA0825Q8IV33 1275 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 CNTNAP4Q9C0A0 1308 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 SLFN14P0C7P3 912 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 GUCY2CP25092 1073 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 CCDC144BQ3MJ40 725 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 CPVLQ9H3G5 476 aa10.2□□□□□ -0.78
XCR1-201ENST00000309285 PSDA5PKW4 1024 aaPredicted RBP10.19□□□□□ -0.78
XCR1-201ENST00000309285 FAM205CA6NFA0 338 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 TTC36A6NLP5 189 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 PPFIA2O75334 1257 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 RAPGEF1Q13905 1077 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 KRT27Q7Z3Y8 459 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 GPIHBP1Q8IV16 184 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 SMYD4Q8IYR2 804 aaPredicted RBP10.19□□□□□ -0.78
XCR1-201ENST00000309285 ARMC2Q8NEN0 867 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 ABTB1Q969K4 478 aaPredicted RBP10.19□□□□□ -0.78
XCR1-201ENST00000309285 TSNARE1Q96NA8 513 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 FRMPD2Q68DX3 1309 aaPredicted RBP10.19□□□□□ -0.78
XCR1-201ENST00000309285 CCDC151A5D8V7 595 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 MGEA5O60502 916 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 SESN3P58005 492 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 BIRC3Q13489 604 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 USP17L2Q6R6M4 530 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 GSTA5Q7RTV2 222 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 IFT20Q8IY31 132 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 REXO1Q8N1G1 1221 aaKnown RBP10.19□□□□□ -0.78
XCR1-201ENST00000309285 FBXL16Q8N461 479 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 LZTS2Q9BRK4 669 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 FAM169AQ9Y6X4 670 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 FOXN1O15353 648 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 LUC7L3O95232 432 aaKnown RBP10.19□□□□□ -0.78
XCR1-201ENST00000309285 GUCY2FP51841 1108 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 IFI16Q16666 785 aaKnown RBP10.19□□□□□ -0.78
XCR1-201ENST00000309285 RUFY4Q6ZNE9 571 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 PLA2G4DQ86XP0 818 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 DGKHQ86XP1 1220 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 VCX3BQ9H321 246 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.19□□□□□ -0.78
XCR1-201ENST00000309285 IKBKBO14920 756 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 AP5Z1O43299 807 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 COBLO75128 1261 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 ZMYND10O75800 440 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 PLCD1P51178 756 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 MAP7Q14244 749 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 GKAP1Q5VSY0 366 aaPredicted RBP10.19□□□□□ -0.78
XCR1-201ENST00000309285 ILDR1Q86SU0 546 aaPredicted RBP10.19□□□□□ -0.78
XCR1-201ENST00000309285 ZNF710Q8N1W2 664 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 NLGN1Q8N2Q7 840 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 SPDL1Q96EA4 605 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 NBPF3Q9H094 633 aa10.19□□□□□ -0.78
XCR1-201ENST00000309285 SALL1Q9NSC2 1324 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 GOLGA8KD6RF30 607 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 CASP1P29466 404 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 RCAN1P53805 252 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 SARM1Q6SZW1 724 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 NSMFQ6X4W1 530 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 KRT25Q7Z3Z0 450 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms