RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 GRIK3Q13003 919 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 IKQ13123 557 aaPredicted RBP1.47□□□□□ -2.17
CEP290-201ENST00000309041 ERAP2Q6P179 960 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 CYFIP1Q7L576 1253 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 SPATS2Q86XZ4 545 aaKnown RBP1.47□□□□□ -2.17
CEP290-201ENST00000309041 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.47□□□□□ -2.17
CEP290-201ENST00000309041 TSPYL6Q8N831 410 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 DDHD1Q8NEL9 900 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 ZMIZ2Q8NF64 920 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 PMM1Q92871 262 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 SPAG8Q99932 426 aaPredicted RBP1.47□□□□□ -2.17
CEP290-201ENST00000309041 YIPF2Q9BWQ6 316 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 JMJD4Q9H9V9 463 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 MAN1C1Q9NR34 630 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 ZNF541Q9H0D2 1346 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 NRXN3Q9Y4C0 1643 aa1.47□□□□□ -2.17
CEP290-201ENST00000309041 MTMR11A4FU01 709 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 SLC38A8A6NNN8 435 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 RNF103O00237 685 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 SOX1O00570 391 aaPredicted RBP1.46□□□□□ -2.17
CEP290-201ENST00000309041 ARPC1BO15143 372 aaKnown RBP1.46□□□□□ -2.17
CEP290-201ENST00000309041 BUD23O43709 281 aaKnown RBP1.46□□□□□ -2.17
CEP290-201ENST00000309041 NRP2O60462 931 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 DDHD2O94830 711 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 GRK4P32298 578 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 SLC39A12Q504Y0 691 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 HABP4Q5JVS0 413 aaKnown RBP1.46□□□□□ -2.17
CEP290-201ENST00000309041 CEP135Q66GS9 1140 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 ZNF611Q8N823 705 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 NGDNQ8NEJ9 315 aaKnown RBP1.46□□□□□ -2.17
CEP290-201ENST00000309041 ZDHHC1Q8WTX9 485 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 RNF34Q969K3 372 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 MISP3Q96FF7 219 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 CFAP57Q96MR6 1250 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 CRAMP1Q96RY5 1269 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 NAP1L4Q99733 375 aaKnown RBP1.46□□□□□ -2.17
CEP290-201ENST00000309041 SDF4Q9BRK5 362 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 C17orf80Q9BSJ5 609 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 ZDHHC5Q9C0B5 715 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 TMEM38AQ9H6F2 299 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 GRPEL1Q9HAV7 217 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 TSKSQ9UJT2 592 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 GDF2Q9UK05 429 aaPredicted RBP1.46□□□□□ -2.17
CEP290-201ENST00000309041 COG6Q9Y2V7 657 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 FAM135BQ49AJ0 1406 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 DIP2BQ9P265 1576 aa1.46□□□□□ -2.17
CEP290-201ENST00000309041 A6NJY4 79 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CDK2AP1O14519 115 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 OPLAHO14841 1288 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CFHP08603 1231 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 SLFN14P0C7P3 912 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PRR29P0C7W0 189 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ERCC2P18074 760 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ITGA3P26006 1051 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 OTX2P32243 289 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 SOX9P48436 509 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 METAP2P50579 478 aaKnown RBP eCLIP1.46□□□□□ -2.18
CEP290-201ENST00000309041 CYP27A1Q02318 531 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 TMED1Q13445 227 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 COG2Q14746 738 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 FXNQ16595 210 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 TSNAXIP1Q2TAA8 658 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 EML3Q32P44 896 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 RASIP1Q5U651 963 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 TRAF7Q6Q0C0 670 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PLEKHM3Q6ZWE6 761 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 GLYCTKQ8IVS8 523 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PAPD5Q8NDF8 572 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 VPS39Q96JC1 886 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 RAB3IPQ96QF0 476 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 TUBGCP2Q9BSJ2 902 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 OSBPL7Q9BZF2 842 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ORC3Q9UBD5 711 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 CLEC4AQ9UMR7 237 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 TULP4Q9NRJ4 1543 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 KIF21BO75037 1637 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 SPTLC2O15270 562 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ERAL1O75616 437 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 RECQL5O94762 991 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 YBX3P16989 372 aaKnown RBP eCLIP1.46□□□□□ -2.18
CEP290-201ENST00000309041 IL6STP40189 918 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 CTSOP43234 321 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 ZNF174Q15697 407 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 INAQ16352 499 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 TRIM71Q2Q1W2 868 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 FAM102BQ5T8I3 360 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 AP1ARQ63HQ0 302 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ARMCX6Q7L4S7 300 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 VWA5B2Q8N398 1253 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 AFAP1L1Q8TED9 768 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 EDAQ92838 391 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 SYTL4Q96C24 671 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 DACH2Q96NX9 599 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 C19orf43Q9BQ61 176 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 NLRC4Q9NPP4 1024 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 GALPQ9UBC7 116 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 UBQLN2Q9UHD9 624 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 KCNG1Q9UIX4 513 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 NOD1Q9Y239 953 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 MRC2Q9UBG0 1479 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms