RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CIAPIN1Q6FI81 312 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 ARHGAP27Q6ZUM4 889 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 MSANTD4Q8NCY6 345 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 DCAF4Q8WV16 495 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 BPIFA3Q9BQP9 254 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 GDAQ9Y2T3 454 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 NWD1Q149M9 1564 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 CEP104O60308 925 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 ARID5BQ14865 1188 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 MAN2A1Q16706 1144 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 RETREG2Q8NC44 543 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 CFAP221Q4G0U5 840 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 ANKRD35Q8N283 1001 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 PAGR1Q9BTK6 254 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 MEIS1O00470 390 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 AOC3Q16853 763 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 MICALCLQ6ZW33 695 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 GSTA5Q7RTV2 222 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 DDX12PQ92771 950 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 GLG1Q92896 1179 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 HPS5Q9UPZ3 1129 aa12.59□□□□□ -0.39
PCDHGC3-201ENST00000308177 AKR1B1P15121 316 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 HOXA13P31271 388 aaPredicted RBP12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 TRPC3Q13507 836 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 PEX26Q7Z412 305 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 GPR161Q8N6U8 529 aaKnown RBP12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 DAGLAQ9Y4D2 1042 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 PLA2G4BP0C869 781 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 CAPN2P17655 700 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 FGFR2P21802 821 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 HSPA1LP34931 641 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 SNAP25P60880 206 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 ZRSR2Q15696 482 aaKnown RBP12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 RPGRIP1Q96KN7 1286 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 THAP9Q9H5L6 903 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 MTRF1LQ9UGC7 380 aaKnown RBP12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L10C9JJH3 530 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 ASNSP08243 561 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP14P54578 494 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 ATP2C1P98194 919 aaPredicted RBP12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 GRM1Q13255 1194 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 AP3B2Q13367 1082 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 KRT31Q15323 416 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 EXOC3L4Q17RC7 722 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 CERKQ8TCT0 537 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 MYO3BQ8WXR4 1341 aa12.58□□□□□ -0.4
PCDHGC3-201ENST00000308177 PSMD2Q13200 908 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 SYCE1Q8N0S2 351 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 U2AF1L4Q8WU68 220 aaKnown RBP12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 EFCAB8A8MWE9 144 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L15C9J2P7 530 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L13C9JLJ4 530 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L11C9JVI0 530 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L18D6R9N7 530 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L22D6RA61 530 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L17D6RBQ6 530 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L19D6RCP7 530 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L20D6RJB6 530 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 GAP43P17677 238 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 TNNI1P19237 187 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L24Q0WX57 530 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 CALCOCO2Q13137 446 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 PPP1R7Q15435 360 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 RNF187Q5TA31 235 aaPredicted RBP12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 USP17L6PQ6QN14 398 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 UBL4BQ8N7F7 174 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 DEPTORQ8TB45 409 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 NACC1Q96RE7 527 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 FERMT1Q9BQL6 677 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 CCDC77Q9BR77 488 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 FBXO2Q9UK22 296 aaPredicted RBP12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 BCL9O00512 1426 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 GINS2Q9Y248 185 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 FLT1P17948 1338 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 POTEMA6NI47 508 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 FOXN1O15353 648 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 TCP11X2Q5H9J9 407 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 ARMCX5Q6P1M9 558 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 SMCR8Q8TEV9 937 aaPredicted RBP12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 PHF20Q9BVI0 1012 aa12.57□□□□□ -0.4
PCDHGC3-201ENST00000308177 IFT20Q8IY31 132 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 MLXIPQ9HAP2 919 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 FAM184BQ9ULE4 1060 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 F5H6K3 240 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 KLRC3Q07444 240 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms