RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 TBC1D8BQ0IIM8 1120 aa18.36■□□□□ 0.53
SYVN1-202ENST00000307289 KIF4BQ2VIQ3 1234 aa18.36■□□□□ 0.53
SYVN1-202ENST00000307289 SV2BQ7L1I2 683 aa18.36■□□□□ 0.53
SYVN1-202ENST00000307289 RSRC2Q7L4I2 434 aaKnown RBP18.36■□□□□ 0.53
SYVN1-202ENST00000307289 SIAH1Q8IUQ4 282 aa18.36■□□□□ 0.53
SYVN1-202ENST00000307289 HDAC6Q9UBN7 1215 aa18.36■□□□□ 0.53
SYVN1-202ENST00000307289 FAM198AQ9UFP1 575 aa18.36■□□□□ 0.53
SYVN1-202ENST00000307289 EPN1Q9Y6I3 576 aaPredicted RBP18.36■□□□□ 0.53
SYVN1-202ENST00000307289 NPHP3-ACAD11A0A0J9YXS1 232 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 NDUFA10O95299 355 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 EEF1GP26641 437 aaKnown RBP18.35■□□□□ 0.53
SYVN1-202ENST00000307289 STAT3P40763 770 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 MTIF2P46199 727 aaKnown RBP18.35■□□□□ 0.53
SYVN1-202ENST00000307289 LARP4BQ92615 738 aaKnown RBP18.35■□□□□ 0.53
SYVN1-202ENST00000307289 DHTKD1Q96HY7 919 aaPredicted RBP18.35■□□□□ 0.53
SYVN1-202ENST00000307289 PCMTD1Q96MG8 357 aaPredicted RBP18.35■□□□□ 0.53
SYVN1-202ENST00000307289 PARD6BQ9BYG5 372 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 RIC8AQ9NPQ8 531 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 DDX25Q9UHL0 483 aaKnown RBP18.35■□□□□ 0.53
SYVN1-202ENST00000307289 DUSP10Q9Y6W6 482 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 SASH3O75995 380 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 SSBP05455 408 aaKnown RBP eCLIP18.35■□□□□ 0.53
SYVN1-202ENST00000307289 HERVK_113P62684 666 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 CYP27A1Q02318 531 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 SEPT2Q15019 361 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 OR8K1Q8NGG5 319 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 CCDC51Q96ER9 411 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 PSTPIP2Q9H939 334 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 FAM53CQ9NYF3 392 aa18.35■□□□□ 0.53
SYVN1-202ENST00000307289 FOCADQ5VW36 1801 aa18.34■□□□□ 0.53
SYVN1-202ENST00000307289 LRRC37AA6NMS7 1700 aa18.34■□□□□ 0.53
SYVN1-202ENST00000307289 APBA3O96018 575 aa18.34■□□□□ 0.53
SYVN1-202ENST00000307289 PNMA6AP0CW24 399 aaPredicted RBP18.34■□□□□ 0.53
SYVN1-202ENST00000307289 TRIM21P19474 475 aaKnown RBP18.34■□□□□ 0.53
SYVN1-202ENST00000307289 QRICH1Q2TAL8 776 aa18.34■□□□□ 0.53
SYVN1-202ENST00000307289 DDX12PQ92771 950 aa18.34■□□□□ 0.53
SYVN1-202ENST00000307289 CDK5RAP3Q96JB5 506 aa18.34■□□□□ 0.53
SYVN1-202ENST00000307289 NOC4LQ9BVI4 516 aaKnown RBP18.34■□□□□ 0.53
SYVN1-202ENST00000307289 POLD4Q9HCU8 107 aa18.34■□□□□ 0.53
SYVN1-202ENST00000307289 ZBTB5O15062 677 aa18.34■□□□□ 0.53
SYVN1-202ENST00000307289 CLK2P49760 499 aaKnown RBP18.34■□□□□ 0.53
SYVN1-202ENST00000307289 SLC30A10Q6XR72 485 aa18.34■□□□□ 0.53
SYVN1-202ENST00000307289 E9PMD0 336 aa18.33■□□□□ 0.53
SYVN1-202ENST00000307289 MYL1P05976 194 aa18.33■□□□□ 0.53
SYVN1-202ENST00000307289 FXR2P51116 673 aaKnown RBP eCLIP18.33■□□□□ 0.53
SYVN1-202ENST00000307289 KRT222Q8N1A0 295 aa18.33■□□□□ 0.53
SYVN1-202ENST00000307289 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.53
SYVN1-202ENST00000307289 DNAJC7Q99615 494 aa18.33■□□□□ 0.53
SYVN1-202ENST00000307289 TTYH3Q9C0H2 523 aa18.33■□□□□ 0.53
SYVN1-202ENST00000307289 CUEDC2Q9H467 287 aa18.33■□□□□ 0.53
SYVN1-202ENST00000307289 PRDM4Q9UKN5 801 aa18.33■□□□□ 0.53
SYVN1-202ENST00000307289 CAPN11Q9UMQ6 739 aa18.33■□□□□ 0.53
SYVN1-202ENST00000307289 ZRANB2O95218 330 aaKnown RBP eCLIP18.33■□□□□ 0.52
SYVN1-202ENST00000307289 NCAPH2Q6IBW4 605 aa18.33■□□□□ 0.52
SYVN1-202ENST00000307289 RAD54LQ92698 747 aa18.33■□□□□ 0.52
SYVN1-202ENST00000307289 AKT1S1Q96B36 256 aa18.33■□□□□ 0.52
SYVN1-202ENST00000307289 LACRTQ9GZZ8 138 aa18.33■□□□□ 0.52
SYVN1-202ENST00000307289 HLA-DOAP06340 250 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 PLA2G4AP47712 749 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 DMTNQ08495 405 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 RRP1BQ14684 758 aaKnown RBP18.32■□□□□ 0.52
SYVN1-202ENST00000307289 HHIPL2Q6UWX4 724 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 KRT26Q7Z3Y9 468 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 CUL5Q93034 780 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 FAM207AQ9NSI2 230 aaPredicted RBP18.32■□□□□ 0.52
SYVN1-202ENST00000307289 SRGAP2O75044 1071 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 SLC1A4P43007 532 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 USH1GQ495M9 461 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 SWAP70Q9UH65 585 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 MYH7BA7E2Y1 1941 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 SCN9AQ15858 1988 aa18.32■□□□□ 0.52
SYVN1-202ENST00000307289 MARCH6O60337 910 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 DNM2P50570 870 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 CHMP4BP1P59074 171 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 APBA1Q02410 837 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 SPICE1Q8N0Z3 855 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 BCAS3Q9H6U6 928 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 TDRD3Q9H7E2 651 aaKnown RBP18.31■□□□□ 0.52
SYVN1-202ENST00000307289 CTAGE9A4FU28 777 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 AOC3Q16853 763 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 TMEM266Q2M3C6 531 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 CERKLQ49MI3 558 aaPredicted RBP18.31■□□□□ 0.52
SYVN1-202ENST00000307289 KRT79Q5XKE5 535 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 TMCO3Q6UWJ1 677 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 MASTLQ96GX5 879 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 PNKPQ96T60 521 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 CDC23Q9UJX2 597 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 COL11A2P13942 1736 aaPredicted RBP18.31■□□□□ 0.52
SYVN1-202ENST00000307289 A0A1W2PQC6 194 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 POTEB3A0JP26 581 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 POTECB2RU33 542 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 ECE2O60344 883 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 AMPD3Q01432 767 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 CENPPQ6IPU0 288 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 CNNM4Q6P4Q7 775 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 POTEBQ6S5H4 581 aa18.31■□□□□ 0.52
SYVN1-202ENST00000307289 C2CD5Q86YS7 1000 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms