RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 KANK3Q6NY19 840 aa19.84■□□□□ 0.77
KRT28-201ENST00000306658 ZNF526Q8TF50 670 aaPredicted RBP19.84■□□□□ 0.77
KRT28-201ENST00000306658 RAB34Q9BZG1 259 aa19.84■□□□□ 0.77
KRT28-201ENST00000306658 HOMER2Q9NSB8 354 aa19.84■□□□□ 0.77
KRT28-201ENST00000306658 USP25Q9UHP3 1055 aa19.84■□□□□ 0.77
KRT28-201ENST00000306658 RABGAP1Q9Y3P9 1069 aa19.84■□□□□ 0.77
KRT28-201ENST00000306658 NFIBO00712 420 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 TXKP42681 527 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 MRE11P49959 708 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 PABPC4Q13310 644 aaKnown RBP eCLIP19.83■□□□□ 0.76
KRT28-201ENST00000306658 SNAPC2Q13487 334 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 TKFCQ3LXA3 575 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 SNRNP48Q6IEG0 339 aaKnown RBP19.83■□□□□ 0.76
KRT28-201ENST00000306658 PDILTQ8N807 584 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 MB21D1Q8N884 522 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 MBOAT7Q96N66 472 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 FUCA2Q9BTY2 467 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 TEX13BQ9BXU2 312 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 PANK2Q9BZ23 570 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 ZNF214Q9UL59 606 aaPredicted RBP19.83■□□□□ 0.76
KRT28-201ENST00000306658 AGTPBP1Q9UPW5 1226 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 LOC285556D6RIA3 1793 aa19.83■□□□□ 0.76
KRT28-201ENST00000306658 CELF2O95319 508 aaKnown RBP19.82■□□□□ 0.76
KRT28-201ENST00000306658 CIITAP33076 1130 aa19.82■□□□□ 0.76
KRT28-201ENST00000306658 ZNF76P36508 570 aa19.82■□□□□ 0.76
KRT28-201ENST00000306658 UBA7P41226 1012 aa19.82■□□□□ 0.76
KRT28-201ENST00000306658 IRX3P78415 501 aaPredicted RBP19.82■□□□□ 0.76
KRT28-201ENST00000306658 TMEM132BQ14DG7 1078 aa19.82■□□□□ 0.76
KRT28-201ENST00000306658 MUM1L1Q5H9M0 696 aa19.82■□□□□ 0.76
KRT28-201ENST00000306658 MAF1Q9H063 256 aa19.82■□□□□ 0.76
KRT28-201ENST00000306658 COL11A1P12107 1806 aaPredicted RBP19.81■□□□□ 0.76
KRT28-201ENST00000306658 TECP42680 631 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 FXR2P51116 673 aaKnown RBP eCLIP19.81■□□□□ 0.76
KRT28-201ENST00000306658 PDIA5Q14554 519 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 Q4G0T1 1027 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 IQUBQ8NA54 791 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 GRPEL1Q9HAV7 217 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 RNF146Q9NTX7 359 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 KIAA1468Q9P260 1216 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 TBX3O15119 743 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 STAT3P40763 770 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 TYRO3Q06418 890 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 CHADLQ6NUI6 762 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 SLFN12Q8IYM2 578 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 CEP57L1Q8IYX8 460 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 IGSF22Q8N9C0 903 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 DHX58Q96C10 678 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 CCSER1Q9C0I3 900 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 CCDC39Q9UFE4 941 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 SERTAD1Q9UHV2 236 aa19.81■□□□□ 0.76
KRT28-201ENST00000306658 SLFN14P0C7P3 912 aa19.8■□□□□ 0.76
KRT28-201ENST00000306658 PLS1Q14651 629 aa19.8■□□□□ 0.76
KRT28-201ENST00000306658 ZRSR1Q15695 479 aaKnown RBP19.8■□□□□ 0.76
KRT28-201ENST00000306658 PRR16Q569H4 304 aa19.8■□□□□ 0.76
KRT28-201ENST00000306658 LBX2Q6XYB7 198 aa19.8■□□□□ 0.76
KRT28-201ENST00000306658 RNF207Q6ZRF8 634 aa19.8■□□□□ 0.76
KRT28-201ENST00000306658 TTC12Q9H892 705 aaPredicted RBP19.8■□□□□ 0.76
KRT28-201ENST00000306658 KCNMB3Q9NPA1 279 aa19.8■□□□□ 0.76
KRT28-201ENST00000306658 PCDHA12Q9UN75 941 aa19.8■□□□□ 0.76
KRT28-201ENST00000306658 RIPK3Q9Y572 518 aa19.8■□□□□ 0.76
KRT28-201ENST00000306658 OSBPP22059 807 aa19.79■□□□□ 0.76
KRT28-201ENST00000306658 DEKP35659 375 aaKnown RBP19.79■□□□□ 0.76
KRT28-201ENST00000306658 RPS6P62753 249 aaKnown RBP19.79■□□□□ 0.76
KRT28-201ENST00000306658 RASSF8Q8NHQ8 419 aa19.79■□□□□ 0.76
KRT28-201ENST00000306658 SYTL5Q8TDW5 730 aaPredicted RBP19.79■□□□□ 0.76
KRT28-201ENST00000306658 HAS1Q92839 578 aa19.79■□□□□ 0.76
KRT28-201ENST00000306658 ASCC2Q9H1I8 757 aaPredicted RBP19.79■□□□□ 0.76
KRT28-201ENST00000306658 LRWD1Q9UFC0 647 aa19.79■□□□□ 0.76
KRT28-201ENST00000306658 A0A087X0B3 334 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 FAM86B1E9PN63 330 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 ACTN4O43707 911 aaKnown RBP19.78■□□□□ 0.76
KRT28-201ENST00000306658 FAM86B2P0C5J1 330 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 CDC25AP30304 524 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 GJA5P36382 358 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 MOGSQ13724 837 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 NSMFQ6X4W1 530 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 FAM20AQ96MK3 541 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 RBSNQ9H1K0 784 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 ACAD9Q9H845 621 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 ITGBL1O95965 494 aaPredicted RBP19.78■□□□□ 0.76
KRT28-201ENST00000306658 GTF2A2P52657 109 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 CABP7Q86V35 215 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 CHST13Q8NET6 341 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 DISC1Q9NRI5 854 aa19.78■□□□□ 0.76
KRT28-201ENST00000306658 RBBP6Q7Z6E9 1792 aaKnown RBP19.77■□□□□ 0.76
KRT28-201ENST00000306658 RPTORQ8N122 1335 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 PP2D1A8MPX8 630 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 CAVIN2O95810 425 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 CETPP11597 493 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 HERVK_113P62684 666 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 MDM2Q00987 491 aaPredicted RBP19.77■□□□□ 0.76
KRT28-201ENST00000306658 POSTNQ15063 836 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 E2F4Q16254 413 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 STX1AQ16623 288 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 LENG9Q96B70 501 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 COL20A1Q9P218 1284 aa19.77■□□□□ 0.76
KRT28-201ENST00000306658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.76■□□□□ 0.75
KRT28-201ENST00000306658 STAT6P42226 847 aa19.76■□□□□ 0.75
KRT28-201ENST00000306658 KARSQ15046 597 aaKnown RBP19.76■□□□□ 0.75
KRT28-201ENST00000306658 CEP55Q53EZ4 464 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms