RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 MYADML2A6NDP7 307 aa18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 ZEB2O60315 1214 aa18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 PQBP1O60828 265 aaKnown RBP18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 ASGR1P07306 291 aa18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 TLE2Q04725 743 aa18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 APOBRQ0VD83 1088 aa18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 TRAF1Q13077 416 aa18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 SLKQ9H2G2 1235 aaPredicted RBP18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 PDGFCQ9NRA1 345 aa18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 MAD2L2Q9UI95 211 aa18.54■□□□□ 0.56
SRGAP2C-201ENST00000304465 PALM3A6NDB9 673 aaPredicted RBP18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 DCDC2CA8MYV0 355 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 DYNC1LI2O43237 492 aaPredicted RBP18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 SMPD1P17405 629 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 GRM4Q14833 912 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 CCSAPQ6IQ19 270 aaPredicted RBP18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 TAPT1Q6NXT6 567 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 NFXL1Q6ZNB6 911 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 TDHQ8IZJ6 230 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 NECAB1Q8N987 351 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 TMEM87BQ96K49 555 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 MTA3Q9BTC8 594 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 LY9Q9HBG7 655 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 BRPF3Q9ULD4 1205 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 GNEQ9Y223 722 aaKnown RBP18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 Q9Y3F1 56 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 ELP1O95163 1332 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 MCM3APO60318 1980 aa18.53■□□□□ 0.56
SRGAP2C-201ENST00000304465 ZBTB5O15062 677 aa18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 CLTBP09497 229 aa18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 BEX3Q00994 111 aa18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 FSCN1Q16658 493 aaKnown RBP18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 HOMER1Q86YM7 354 aa18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 TMTC2Q8N394 836 aa18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 ZNF274Q96GC6 653 aaPredicted RBP18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 WDR11Q9BZH6 1224 aa18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 PDLIM7Q9NR12 457 aa18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 MROH7Q68CQ1 1323 aa18.52■□□□□ 0.56
SRGAP2C-201ENST00000304465 PFKFB2O60825 505 aa18.52■□□□□ 0.55
SRGAP2C-201ENST00000304465 PDIA3P30101 505 aaKnown RBP18.52■□□□□ 0.55
SRGAP2C-201ENST00000304465 IRX5P78411 483 aaPredicted RBP18.52■□□□□ 0.55
SRGAP2C-201ENST00000304465 SGMS1Q86VZ5 419 aa18.52■□□□□ 0.55
SRGAP2C-201ENST00000304465 CTCFLQ8NI51 663 aaPredicted RBP18.52■□□□□ 0.55
SRGAP2C-201ENST00000304465 NSUN6Q8TEA1 469 aaKnown RBP18.52■□□□□ 0.55
SRGAP2C-201ENST00000304465 PCDHA1Q9Y5I3 950 aa18.52■□□□□ 0.55
SRGAP2C-201ENST00000304465 A0A0U1RQG5 324 aaPredicted RBP18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 CCDC69A6NI79 296 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 CABYRO75952 493 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 CFBP00751 764 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 KIF5BP33176 963 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 LIFRP42702 1097 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 NKX3-2P78367 333 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 TROAPQ12815 778 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 DUSP28Q4G0W2 176 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 CCDC83Q8IWF9 413 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 SCFD2Q8WU76 684 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 GTF3C6Q969F1 213 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 TOX2Q96NM4 488 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 TMEM39AQ9NV64 488 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 PCDH10Q9P2E7 1040 aa18.51■□□□□ 0.55
SRGAP2C-201ENST00000304465 RAG1P15918 1043 aa18.5■□□□□ 0.55
SRGAP2C-201ENST00000304465 FGD1P98174 961 aa18.5■□□□□ 0.55
SRGAP2C-201ENST00000304465 PPP2R5BQ15173 497 aa18.5■□□□□ 0.55
SRGAP2C-201ENST00000304465 BRDTQ58F21 947 aaPredicted RBP18.5■□□□□ 0.55
SRGAP2C-201ENST00000304465 ANKRD33Q7Z3H0 272 aa18.5■□□□□ 0.55
SRGAP2C-201ENST00000304465 SYTL5Q8TDW5 730 aaPredicted RBP18.5■□□□□ 0.55
SRGAP2C-201ENST00000304465 TBC1D5Q92609 795 aa18.5■□□□□ 0.55
SRGAP2C-201ENST00000304465 NKRFO15226 690 aaKnown RBP eCLIP18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 TLR3O15455 904 aaKnown RBP18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 DDAH1O94760 285 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 HSP90AA1P07900 732 aaKnown RBP18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 EDNRBP24530 442 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 SCRN1Q12765 414 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 ARHGEF16Q5VV41 709 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 CXCL17Q6UXB2 119 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 SH3RF1Q7Z6J0 888 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 ZNF654Q8IZM8 581 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 BADQ92934 168 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 MTMR8Q96EF0 704 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 PIGSQ96S52 555 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 RMDN3Q96TC7 470 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 RIOX1Q9H6W3 641 aa18.49■□□□□ 0.55
SRGAP2C-201ENST00000304465 KLF18A0A0U1RQI7 1052 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 RBM47A0AV96 593 aaKnown RBP18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 TRIM43BA6NCK2 446 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 ARVCFO00192 962 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 CTAGE5O15320 804 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 DTNBO60941 627 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 CPT1AP50416 773 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 STK3Q13188 491 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 TTLL4Q14679 1199 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 STXBP2Q15833 593 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 OR6J1Q8NGC5 347 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 TRIM43Q96BQ3 446 aaPredicted RBP18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 TAAR1Q96RJ0 339 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 IWS1Q96ST2 819 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 MAP3K14Q99558 947 aa18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 MAP3K20Q9NYL2 800 aaKnown RBP18.48■□□□□ 0.55
SRGAP2C-201ENST00000304465 PNMA6FA0A0J9YX94 578 aa18.47■□□□□ 0.55
SRGAP2C-201ENST00000304465 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms