RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 LSG1Q9H089 658 aaKnown RBP12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 GPHNQ9NQX3 736 aaPredicted RBP12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 PCDHA1Q9Y5I3 950 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 RBM47A0AV96 593 aaKnown RBP12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 CCDC69A6NI79 296 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 MYL3P08590 195 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 TXNP10599 105 aaKnown RBP12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 EIF2AK2P19525 551 aaKnown RBP12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 KIF5BP33176 963 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 MCM5P33992 734 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 ANTXR2P58335 489 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 ITGA7Q13683 1181 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 STXBP2Q15833 593 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 TMEM63BQ5T3F8 832 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 CREB3L3Q68CJ9 461 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 ZNF654Q8IZM8 581 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 TBC1D5Q92609 795 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 TAAR1Q96RJ0 339 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 PIGSQ96S52 555 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 SENP2Q9HC62 589 aa12.61□□□□□ -0.39
HMGN1P35-201ENST00000303758 SLC27A2O14975 620 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 CDC45O75419 566 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 DDAH1O94760 285 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 TIMP1P01033 207 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 NEFLP07196 543 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 ITGB8P26012 769 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 CDK7P50613 346 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 TROAPQ12815 778 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 SHHQ15465 462 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 SEPT14Q6ZU15 432 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 DEFB123Q8N688 67 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 PIBF1Q8WXW3 757 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 MTMR8Q96EF0 704 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 TMEM87BQ96K49 555 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 IWS1Q96ST2 819 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 PPP1R12CQ9BZL4 782 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 LY9Q9HBG7 655 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 COL20A1Q9P218 1284 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 TBX21Q9UL17 535 aa12.6□□□□□ -0.39
HMGN1P35-201ENST00000303758 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 MYH7BA7E2Y1 1941 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 PPP1R11O60927 126 aaPredicted RBP12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 PSMC6P62333 389 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 PPIGQ13427 754 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 TMEM199Q8N511 208 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 IGDCC4Q8TDY8 1250 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 COPS5Q92905 334 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 RNPC3Q96LT9 517 aaKnown RBP12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 MTG1Q9BT17 334 aaPredicted RBP12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 MTA3Q9BTC8 594 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 MYL10Q9BUA6 226 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 RIOX1Q9H6W3 641 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 PXMP2Q9NR77 195 aa12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 MAP3K20Q9NYL2 800 aaKnown RBP12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 SEC63Q9UGP8 760 aaKnown RBP12.59□□□□□ -0.39
HMGN1P35-201ENST00000303758 PNMA6FA0A0J9YX94 578 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 GCOM1H8Y6P7 765 aaPredicted RBP12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 SH2B2O14492 632 aaPredicted RBP12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 GH1P01241 217 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 POLR2MP0CAP2 368 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 CALM1P0DP23 149 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 CALM2P0DP24 149 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 CALM3P0DP25 149 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 MYCLP12524 364 aaPredicted RBP12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 HOXA13P31271 388 aaPredicted RBP12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 GNAQP50148 359 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 HSD17B4P51659 736 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 CHMP4BP1P59074 171 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 FAM47CQ5HY64 1035 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 MFSD5Q6N075 450 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 Q7L0L9 218 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 SAMD3Q8N6K7 520 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 RRP36Q96EU6 259 aaKnown RBP12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 MAP3K14Q99558 947 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 HIPK3Q9H422 1215 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 MRVI1Q9Y6F6 885 aa12.58□□□□□ -0.4
HMGN1P35-201ENST00000303758 OPLAHO14841 1288 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 CYTH3O43739 400 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 KPNA6O60684 536 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 EIF3JO75822 258 aaKnown RBP12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 ARIH2O95376 493 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 CD4P01730 458 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 NR3C2P08235 984 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 PURAQ00577 322 aaKnown RBP12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 NECTIN1Q15223 517 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 LY6KQ17RY6 165 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 ZNF697Q5TEC3 545 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 SYNE3Q6ZMZ3 975 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 FCHSD1Q86WN1 690 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 SLC43A3Q8NBI5 491 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 SPZ1Q9BXG8 430 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms