RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 SPATA1Q5VX52 437 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 CNNM4Q6P4Q7 775 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 CCDC186Q7Z3E2 898 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 SCYL3Q8IZE3 742 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 STAMQ92783 540 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 CCDC47Q96A33 483 aaKnown RBP11.92□□□□□ -0.5
CLP1-201ENST00000302731 FAM20AQ96MK3 541 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 FHDC1Q9C0D6 1143 aaPredicted RBP11.92□□□□□ -0.5
CLP1-201ENST00000302731 XPO4Q9C0E2 1151 aaKnown RBP11.92□□□□□ -0.5
CLP1-201ENST00000302731 LRRC27Q9C0I9 530 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 BLZF1Q9H2G9 400 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 EHMT1Q9H9B1 1298 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 IFNKQ9P0W0 207 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 NFE2L3Q9Y4A8 694 aa11.92□□□□□ -0.5
CLP1-201ENST00000302731 GCOM1H8Y6P7 765 aaPredicted RBP11.91□□□□□ -0.5
CLP1-201ENST00000302731 KLRC4O43908 158 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 MARCH6O60337 910 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 ICAM1P05362 532 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 POLR2MP0CAP2 368 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 CASP1P29466 404 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 GHRHRQ02643 423 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 GRB10Q13322 594 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 ZYXQ15942 572 aaKnown RBP11.91□□□□□ -0.5
CLP1-201ENST00000302731 TMEM119Q4V9L6 283 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 CDK5RAP3Q96JB5 506 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 MED15Q96RN5 788 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 P2RX7Q99572 595 aaKnown RBP11.91□□□□□ -0.5
CLP1-201ENST00000302731 SLF1Q9BQI6 1058 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 TRIM9Q9C026 710 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 MAP3K20Q9NYL2 800 aaKnown RBP11.91□□□□□ -0.5
CLP1-201ENST00000302731 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.91□□□□□ -0.5
CLP1-201ENST00000302731 RWDD2AQ9UIY3 292 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 SYNRGQ9UMZ2 1314 aa11.91□□□□□ -0.5
CLP1-201ENST00000302731 POTEMA6NI47 508 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 SERPINC1P01008 464 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 ATP1A3P13637 1013 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
CLP1-201ENST00000302731 PTGS1P23219 599 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 UBASH3AP57075 661 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 SUPT20HL1Q3ZLR7 823 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 COBLL1Q53SF7 1204 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 NOL9Q5SY16 702 aaKnown RBP11.9□□□□□ -0.5
CLP1-201ENST00000302731 SV2BQ7L1I2 683 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 KCTD17Q8N5Z5 321 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 ETNPPLQ8TBG4 499 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 SNX29Q8TEQ0 813 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 LRRC15Q8TF66 581 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
CLP1-201ENST00000302731 LENG9Q96B70 501 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 C12orf42Q96LP6 360 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 PNMA5Q96PV4 448 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 KCNF1Q9H3M0 494 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 BLOC1S4Q9NUP1 217 aa11.9□□□□□ -0.5
CLP1-201ENST00000302731 SCAF8Q9UPN6 1271 aaKnown RBP11.9□□□□□ -0.5
CLP1-201ENST00000302731 C19orf81C9J6K1 198 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 INPP5BP32019 993 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 BACE1P56817 501 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 STIM1Q13586 685 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 CCDC144BQ3MJ40 725 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 CCDC174Q6PII3 467 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 CCDC84Q86UT8 332 aaPredicted RBP11.89□□□□□ -0.51
CLP1-201ENST00000302731 GIMAP8Q8ND71 665 aaPredicted RBP11.89□□□□□ -0.51
CLP1-201ENST00000302731 PICK1Q9NRD5 415 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 FBXO28Q9NVF7 368 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 GGA3Q9NZ52 723 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 ZNF536O15090 1300 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 PVALEFA0A1B0GWK0 134 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 CFBP00751 764 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 PTPRAP18433 802 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 VCAM1P19320 739 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 CDK11BP21127 795 aaKnown RBP11.89□□□□□ -0.51
CLP1-201ENST00000302731 HOXA13P31271 388 aaPredicted RBP11.89□□□□□ -0.51
CLP1-201ENST00000302731 EPS15P42566 896 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 HIRAP54198 1017 aaPredicted RBP11.89□□□□□ -0.51
CLP1-201ENST00000302731 PAK1Q13153 545 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 CDKAL1Q5VV42 579 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 MCF2L2Q86YR7 1114 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 ADSSL1Q8N142 457 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 ZNF280CQ8ND82 737 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 KIAA1524Q8TCG1 905 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 RAD54LQ92698 747 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 KLRG1Q96E93 195 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 ZNF830Q96NB3 372 aaPredicted RBP11.89□□□□□ -0.51
CLP1-201ENST00000302731 CTAGE1Q96RT6 745 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 WRNIP1Q96S55 665 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 SLC38A10Q9HBR0 1119 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 ADARB2Q9NS39 739 aaKnown RBP11.89□□□□□ -0.51
CLP1-201ENST00000302731 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 PPP1R9AQ9ULJ8 1098 aa11.89□□□□□ -0.51
CLP1-201ENST00000302731 FAM86B1E9PN63 330 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 FAM86B2P0C5J1 330 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 HSD17B4P51659 736 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 SPAG1Q07617 926 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms