RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 NTRK3Q16288 839 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 MAMDC4Q6UXC1 1216 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 BTNL9Q6UXG8 535 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 FAM160B2Q86V87 743 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 NSUN7Q8NE18 718 aaKnown RBP17.43■□□□□ 0.38
UBXN1-202ENST00000301935 MYLIPQ8WY64 445 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 FEM1BQ9UK73 627 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 RIPK3Q9Y572 518 aa17.43■□□□□ 0.38
UBXN1-202ENST00000301935 SPTBN5Q9NRC6 3674 aaKnown RBP17.42■□□□□ 0.38
UBXN1-202ENST00000301935 DNAJC25-GNG10A0A024R161 153 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 MOXD2PA6NHM9 499 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 ATP2A1O14983 1001 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 PRPF3O43395 683 aaKnown RBP17.42■□□□□ 0.38
UBXN1-202ENST00000301935 SNAI1O95863 264 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-202ENST00000301935 ACLYP53396 1101 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 FPGSQ05932 587 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 FAAP100Q0VG06 881 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 ST3GAL1Q11201 340 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 ANKRD33Q7Z3H0 272 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 RAB11FIP4Q86YS3 637 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-202ENST00000301935 FAM184AQ8NB25 1140 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 KLHDC9Q8NEP7 349 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 TOX2Q96NM4 488 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 TMEM39AQ9NV64 488 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 ZHX1Q9UKY1 873 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-202ENST00000301935 MTMR7Q9Y216 660 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 MCM3APO60318 1980 aa17.42■□□□□ 0.38
UBXN1-202ENST00000301935 PTPDC1A2A3K4 754 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 CTDNEP1O95476 244 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 FDX1P10109 184 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 FUT2Q10981 343 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 TRAF1Q13077 416 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBXN1-202ENST00000301935 ZNF467Q7Z7K2 595 aaPredicted RBP17.41■□□□□ 0.38
UBXN1-202ENST00000301935 STAG2Q8N3U4 1231 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 SRBD1Q8N5C6 995 aaKnown RBP17.41■□□□□ 0.38
UBXN1-202ENST00000301935 PRPF38AQ8NAV1 312 aaKnown RBP17.41■□□□□ 0.38
UBXN1-202ENST00000301935 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 RIOX1Q9H6W3 641 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 FAM184BQ9ULE4 1060 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 LRRC37A2A6NM11 1700 aa17.41■□□□□ 0.38
UBXN1-202ENST00000301935 DUSP11O75319 330 aaKnown RBP17.4■□□□□ 0.38
UBXN1-202ENST00000301935 DEXIO95424 95 aa17.4■□□□□ 0.38
UBXN1-202ENST00000301935 FOSL2P15408 326 aa17.4■□□□□ 0.38
UBXN1-202ENST00000301935 XBP1P17861 261 aa17.4■□□□□ 0.38
UBXN1-202ENST00000301935 GJB2P29033 226 aa17.4■□□□□ 0.38
UBXN1-202ENST00000301935 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
UBXN1-202ENST00000301935 STAT2P52630 851 aa17.4■□□□□ 0.38
UBXN1-202ENST00000301935 CCSAPQ6IQ19 270 aaPredicted RBP17.4■□□□□ 0.38
UBXN1-202ENST00000301935 CPXCR1Q8N123 301 aa17.4■□□□□ 0.38
UBXN1-202ENST00000301935 RRP36Q96EU6 259 aaKnown RBP17.4■□□□□ 0.38
UBXN1-202ENST00000301935 GPCPD1Q9NPB8 672 aa17.4■□□□□ 0.38
UBXN1-202ENST00000301935 ORC3Q9UBD5 711 aaPredicted RBP17.4■□□□□ 0.38
UBXN1-202ENST00000301935 ISY1Q9ULR0 285 aaKnown RBP17.4■□□□□ 0.38
UBXN1-202ENST00000301935 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
UBXN1-202ENST00000301935 MYADML2A6NDP7 307 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 DCDC2CA8MYV0 355 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 TMEM232C9JQI7 657 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 hCG_1984214I3L0E3 225 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 ADCY6O43306 1168 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 ZBED4O75132 1171 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 PLEKHA8P1O95397 391 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 CST5P28325 142 aaPredicted RBP17.39■□□□□ 0.37
UBXN1-202ENST00000301935 IKQ13123 557 aaPredicted RBP17.39■□□□□ 0.37
UBXN1-202ENST00000301935 KCNA10Q16322 511 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 KCTD1Q719H9 257 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 ZNF713Q8N859 430 aaPredicted RBP17.39■□□□□ 0.37
UBXN1-202ENST00000301935 FGD4Q96M96 766 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 SLC26A6Q9BXS9 759 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 SLC38A10Q9HBR0 1119 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.39■□□□□ 0.37
UBXN1-202ENST00000301935 SEC63Q9UGP8 760 aaKnown RBP17.39■□□□□ 0.37
UBXN1-202ENST00000301935 PNMA2Q9UL42 364 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 MROH7Q68CQ1 1323 aa17.39■□□□□ 0.37
UBXN1-202ENST00000301935 FRMPD2Q68DX3 1309 aaPredicted RBP17.39■□□□□ 0.37
UBXN1-202ENST00000301935 GOLGA8HP0CJ92 632 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 ACVR2BQ13705 512 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 SYDE2Q5VT97 1194 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 ANKRD35Q8N283 1001 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 KIFC2Q96AC6 838 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 GLT1D1Q96MS3 346 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 ABHD16BQ9H3Z7 469 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 RAVER2Q9HCJ3 691 aaKnown RBP17.38■□□□□ 0.37
UBXN1-202ENST00000301935 FBXO40Q9UH90 709 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 TBX21Q9UL17 535 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 CTDP1Q9Y5B0 961 aaPredicted RBP17.38■□□□□ 0.37
UBXN1-202ENST00000301935 V9GY48 417 aaPredicted RBP17.38■□□□□ 0.37
UBXN1-202ENST00000301935 ELP1O95163 1332 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 CNTNAP5Q8WYK1 1306 aa17.38■□□□□ 0.37
UBXN1-202ENST00000301935 JAK2O60674 1132 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 TIMP1P01033 207 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 ASGR1P07306 291 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 C6orf222P0C671 652 aaPredicted RBP17.37■□□□□ 0.37
UBXN1-202ENST00000301935 DNAJB2P25686 324 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 OAZ1P54368 228 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 IRX5P78411 483 aaPredicted RBP17.37■□□□□ 0.37
UBXN1-202ENST00000301935 ADGRF4Q8IZF3 695 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms