RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MAGEC2Q9UBF1 373 aaPredicted RBP15.9■□□□□ 0.14
CDT1-201ENST00000301019 SH3TC1Q8TE82 1336 aa15.9■□□□□ 0.14
CDT1-201ENST00000301019 PCK1P35558 622 aa15.9■□□□□ 0.14
CDT1-201ENST00000301019 IGHMBP2P38935 993 aaKnown RBP15.9■□□□□ 0.14
CDT1-201ENST00000301019 CPDO75976 1380 aa15.9■□□□□ 0.14
CDT1-201ENST00000301019 CRYBG1Q9Y4K1 1723 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 MGRN1O60291 552 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 USO1O60763 962 aaKnown RBP15.89■□□□□ 0.13
CDT1-201ENST00000301019 CDKL5O76039 1030 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 MMGT1Q8N4V1 131 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDT1-201ENST00000301019 PCDHA13Q9Y5I0 950 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 JCADQ9P266 1359 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 TRAPPC3O43617 180 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 SMNDC1O75940 238 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDT1-201ENST00000301019 ALDH5A1P51649 535 aaPredicted RBP15.89■□□□□ 0.13
CDT1-201ENST00000301019 RRAGAQ7L523 313 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 IRF2BP1Q8IU81 584 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.89■□□□□ 0.132e-9■■■■■ 32.5
CDT1-201ENST00000301019 FBXL5Q9UKA1 691 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 XDHP47989 1333 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 FOXO6A8MYZ6 492 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 SMIM22K7EJ46 135 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 EPB41P11171 864 aaKnown RBP15.89■□□□□ 0.13
CDT1-201ENST00000301019 MAGEA1P43355 309 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 NT5DC1Q5TFE4 455 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 RCSD1Q6JBY9 416 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 HOOK2Q96ED9 719 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 MTRQ99707 1265 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 NEUROG2Q9H2A3 272 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 STRN4Q9NRL3 753 aa15.89■□□□□ 0.13
CDT1-201ENST00000301019 FAM217BQ9NTX9 383 aaPredicted RBP15.89■□□□□ 0.13
CDT1-201ENST00000301019 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
CDT1-201ENST00000301019 TRIM75PA6NK02 468 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 IGF2BP3O00425 579 aaKnown RBP eCLIP15.88■□□□□ 0.13
CDT1-201ENST00000301019 MMP1P03956 469 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 COPB2P35606 906 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 MIGA2Q7L4E1 593 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 CCT6BQ92526 530 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 SRPRBQ9Y5M8 271 aaKnown RBP15.88■□□□□ 0.13
CDT1-201ENST00000301019 SLC1A4P43007 532 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 TRIM74Q86UV6 250 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 TRIM73Q86UV7 250 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 TRIML1Q8N9V2 468 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 TRIM58Q8NG06 486 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 B4GALNT2Q8NHY0 566 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 TSGA10Q9BZW7 698 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 DDX47Q9H0S4 455 aaKnown RBP15.88■□□□□ 0.13
CDT1-201ENST00000301019 NOP53Q9NZM5 478 aaKnown RBP15.88■□□□□ 0.13
CDT1-201ENST00000301019 ATP8A1Q9Y2Q0 1164 aa15.88■□□□□ 0.13
CDT1-201ENST00000301019 ROBO1Q9Y6N7 1651 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 F8W031 263 aaPredicted RBP15.87■□□□□ 0.13
CDT1-201ENST00000301019 ECEL1O95672 775 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 PAPOLAP51003 745 aaKnown RBP15.87■□□□□ 0.13
CDT1-201ENST00000301019 TCIRG1Q13488 830 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 SLC4A8Q2Y0W8 1093 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 TBC1D25Q3MII6 688 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 TRIM22Q8IYM9 498 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 CCDC47Q96A33 483 aaKnown RBP15.87■□□□□ 0.13
CDT1-201ENST00000301019 TUBGCP2Q9BSJ2 902 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 PRDM11Q9NQV5 511 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 PNMA3Q9UL41 463 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 UBOX5O94941 541 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 ATP4AP20648 1035 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 KIF11P52732 1056 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 ZNF844Q08AG5 666 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 PTGDRQ13258 359 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 XRCC4Q13426 336 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 CDC37Q16543 378 aaPredicted RBP15.87■□□□□ 0.13
CDT1-201ENST00000301019 RNF220Q5VTB9 566 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 KANK3Q6NY19 840 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 OTUD6AQ7L8S5 288 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 CSGALNACT2Q8N6G5 542 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 CCDC197Q8NCU1 140 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 ALS2CR12Q96Q35 445 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 TLR10Q9BXR5 811 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 CELF4Q9BZC1 486 aaKnown RBP15.87■□□□□ 0.13
CDT1-201ENST00000301019 LIMA1Q9UHB6 759 aaKnown RBP15.87■□□□□ 0.13
CDT1-201ENST00000301019 SLC8A3P57103 927 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 PLCB4Q15147 1175 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 C1orf141Q5JVX7 400 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 ANKRD20A2Q5SQ80 823 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 ANKRD20A1Q5TYW2 823 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 ANKRD20A3Q5VUR7 823 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 LRRC34Q8IZ02 419 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 ZSWIM5Q9P217 1185 aa15.87■□□□□ 0.13
CDT1-201ENST00000301019 CCT8L1PA6NM43 557 aa15.86■□□□□ 0.13
CDT1-201ENST00000301019 HMGB1P1B2RPK0 211 aaPredicted RBP15.86■□□□□ 0.13
CDT1-201ENST00000301019 PALMO75781 387 aa15.86■□□□□ 0.13
CDT1-201ENST00000301019 NEFHP12036 1026 aa15.86■□□□□ 0.13
CDT1-201ENST00000301019 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
CDT1-201ENST00000301019 LLGL1Q15334 1064 aa15.86■□□□□ 0.13
CDT1-201ENST00000301019 NTRK3Q16288 839 aa15.86■□□□□ 0.13
CDT1-201ENST00000301019 CFAP221Q4G0U5 840 aa15.86■□□□□ 0.13
CDT1-201ENST00000301019 RILPL1Q5EBL4 403 aa15.86■□□□□ 0.13
CDT1-201ENST00000301019 NOC4LQ9BVI4 516 aaKnown RBP15.86■□□□□ 0.13
CDT1-201ENST00000301019 TMBIM4Q9HC24 238 aa15.86■□□□□ 0.13
CDT1-201ENST00000301019 NLRP2Q9NX02 1062 aa15.86■□□□□ 0.13
CDT1-201ENST00000301019 RPS6KL1Q9Y6S9 549 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms