RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ZNF287Q9HBT7 754 aa24.42■■□□□ 1.5
SMCO4-201ENST00000298966 PRRC2BQ5JSZ5 2229 aaKnown RBP24.42■■□□□ 1.5
SMCO4-201ENST00000298966 DYNC1LI2O43237 492 aaPredicted RBP24.41■■□□□ 1.5
SMCO4-201ENST00000298966 FGD1P98174 961 aa24.41■■□□□ 1.5
SMCO4-201ENST00000298966 TFF2Q03403 129 aa24.41■■□□□ 1.5
SMCO4-201ENST00000298966 CUL4AQ13619 759 aa24.41■■□□□ 1.5
SMCO4-201ENST00000298966 ZNF444Q8N0Y2 327 aaPredicted RBP24.41■■□□□ 1.5
SMCO4-201ENST00000298966 MKL1Q969V6 931 aa24.41■■□□□ 1.5
SMCO4-201ENST00000298966 TMEM87BQ96K49 555 aa24.41■■□□□ 1.5
SMCO4-201ENST00000298966 SYNPO2Q9UMS6 1093 aa24.41■■□□□ 1.5
SMCO4-201ENST00000298966 GNEQ9Y223 722 aaKnown RBP24.41■■□□□ 1.5
SMCO4-201ENST00000298966 GRIN2DO15399 1336 aa24.4■■□□□ 1.5
SMCO4-201ENST00000298966 IGKV6D-41A0A0C4DH26 115 aa24.4■■□□□ 1.5
SMCO4-201ENST00000298966 GTPBP6O43824 516 aaPredicted RBP24.4■■□□□ 1.5
SMCO4-201ENST00000298966 B4GALT4O60513 344 aa24.4■■□□□ 1.5
SMCO4-201ENST00000298966 MYOGP15173 224 aa24.4■■□□□ 1.5
SMCO4-201ENST00000298966 PDE4BQ07343 736 aa24.4■■□□□ 1.5
SMCO4-201ENST00000298966 ISY1Q9ULR0 285 aaKnown RBP24.4■■□□□ 1.5
SMCO4-201ENST00000298966 ORC4O43929 436 aa24.39■■□□□ 1.49
SMCO4-201ENST00000298966 BMP3P12645 472 aa24.39■■□□□ 1.49
SMCO4-201ENST00000298966 ATP2A2P16615 1042 aaKnown RBP24.39■■□□□ 1.49
SMCO4-201ENST00000298966 GMCL1P1Q8NEA9 526 aa24.39■■□□□ 1.49
SMCO4-201ENST00000298966 ESR2Q92731 530 aa24.39■■□□□ 1.49
SMCO4-201ENST00000298966 A1CFQ9NQ94 594 aaKnown RBP24.39■■□□□ 1.49
SMCO4-201ENST00000298966 RNF146Q9NTX7 359 aa24.39■■□□□ 1.49
SMCO4-201ENST00000298966 SOWAHBA6NEL2 793 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 PFKMP08237 780 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 CPA1P15085 419 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 DDIT3P35638 169 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 KCNQ1P51787 676 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 CTDSPL2Q05D32 466 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 SART3Q15020 963 aaKnown RBP24.38■■□□□ 1.49
SMCO4-201ENST00000298966 SLFN13Q68D06 897 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 Q6ZUG5 572 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 LRRC47Q8N1G4 583 aaKnown RBP24.38■■□□□ 1.49
SMCO4-201ENST00000298966 CEP95Q96GE4 821 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 SCLYQ96I15 445 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 MTMR4Q9NYA4 1195 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 CIZ1Q9ULV3 898 aaPredicted RBP24.38■■□□□ 1.49
SMCO4-201ENST00000298966 LRRC37A2A6NM11 1700 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 TRANK1O15050 2925 aa24.38■■□□□ 1.49
SMCO4-201ENST00000298966 PRC1O43663 620 aa24.37■■□□□ 1.49
SMCO4-201ENST00000298966 TTLL1O95922 423 aa24.37■■□□□ 1.49
SMCO4-201ENST00000298966 SMPD1P17405 629 aa24.37■■□□□ 1.49
SMCO4-201ENST00000298966 EVCP57679 992 aa24.37■■□□□ 1.49
SMCO4-201ENST00000298966 PSMC6P62333 389 aa24.37■■□□□ 1.49
SMCO4-201ENST00000298966 TOB2Q14106 344 aaPredicted RBP24.37■■□□□ 1.49
SMCO4-201ENST00000298966 TKFCQ3LXA3 575 aa24.37■■□□□ 1.49
SMCO4-201ENST00000298966 TMEM67Q5HYA8 995 aa24.37■■□□□ 1.49
SMCO4-201ENST00000298966 IQSEC1Q6DN90 963 aa24.37■■□□□ 1.49
SMCO4-201ENST00000298966 Q9Y3F1 56 aa24.37■■□□□ 1.49
SMCO4-201ENST00000298966 NEDD4P46934 1319 aa24.36■■□□□ 1.49
SMCO4-201ENST00000298966 TMEM232C9JQI7 657 aa24.36■■□□□ 1.49
SMCO4-201ENST00000298966 POU3F3P20264 500 aaPredicted RBP24.36■■□□□ 1.49
SMCO4-201ENST00000298966 HOXD11P31277 338 aaPredicted RBP24.36■■□□□ 1.49
SMCO4-201ENST00000298966 STAT2P52630 851 aa24.36■■□□□ 1.49
SMCO4-201ENST00000298966 IKQ13123 557 aaPredicted RBP24.36■■□□□ 1.49
SMCO4-201ENST00000298966 CHURC1Q8WUH1 139 aa24.36■■□□□ 1.49
SMCO4-201ENST00000298966 AGBL1Q96MI9 1066 aa24.36■■□□□ 1.49
SMCO4-201ENST00000298966 SLKQ9H2G2 1235 aaPredicted RBP24.36■■□□□ 1.49
SMCO4-201ENST00000298966 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.36■■□□□ 1.49
SMCO4-201ENST00000298966 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.36■■□□□ 1.49
SMCO4-201ENST00000298966 MTCH2Q9Y6C9 303 aa24.36■■□□□ 1.49
SMCO4-201ENST00000298966 PRDM1O75626 825 aa24.35■■□□□ 1.49
SMCO4-201ENST00000298966 FAM160B2Q86V87 743 aa24.35■■□□□ 1.49
SMCO4-201ENST00000298966 TMTC2Q8N394 836 aa24.35■■□□□ 1.49
SMCO4-201ENST00000298966 ZNF274Q96GC6 653 aaPredicted RBP24.35■■□□□ 1.49
SMCO4-201ENST00000298966 PDGFCQ9NRA1 345 aa24.35■■□□□ 1.49
SMCO4-201ENST00000298966 CHMP5Q9NZZ3 219 aa24.35■■□□□ 1.49
SMCO4-201ENST00000298966 COG5Q9UP83 839 aa24.35■■□□□ 1.49
SMCO4-201ENST00000298966 HCN4Q9Y3Q4 1203 aa24.35■■□□□ 1.49
SMCO4-201ENST00000298966 REV3LO60673 3130 aa24.35■■□□□ 1.49
SMCO4-201ENST00000298966 ERICH2A1L162 156 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 B4E1Z4 1266 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 RFXAPO00287 272 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 CA3P07451 260 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 SUPT20HL2P0C7V6 817 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 ACTN1P12814 892 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 ALAS1P13196 640 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 PTGS1P23219 599 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 LIFRP42702 1097 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 TTLL4Q14679 1199 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 CCDC178Q5BJE1 867 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 EEPD1Q7L9B9 569 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 FBXO16Q8IX29 292 aaPredicted RBP24.34■■□□□ 1.49
SMCO4-201ENST00000298966 VWCEQ96DN2 955 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 TRERF1Q96PN7 1200 aa24.34■■□□□ 1.49
SMCO4-201ENST00000298966 TAPT1Q6NXT6 567 aa24.33■■□□□ 1.49
SMCO4-201ENST00000298966 DEFB128Q7Z7B8 93 aa24.33■■□□□ 1.49
SMCO4-201ENST00000298966 SPRYD3Q8NCJ5 442 aa24.33■■□□□ 1.49
SMCO4-201ENST00000298966 BRF1Q92994 677 aa24.33■■□□□ 1.49
SMCO4-201ENST00000298966 LRFN3Q9BTN0 628 aa24.33■■□□□ 1.49
SMCO4-201ENST00000298966 CERS4Q9HA82 394 aa24.33■■□□□ 1.49
SMCO4-201ENST00000298966 VTA1Q9NP79 307 aa24.33■■□□□ 1.49
SMCO4-201ENST00000298966 TOMM22Q9NS69 142 aa24.33■■□□□ 1.49
SMCO4-201ENST00000298966 ARIH1Q9Y4X5 557 aaPredicted RBP24.33■■□□□ 1.49
SMCO4-201ENST00000298966 SCN5AQ14524 2016 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 KDM4AO75164 1064 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 TSPY3P0CV98 308 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 TSPY8P0CW00 308 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms