RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 PFKFB2O60825 505 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 SRGAP2CP0DJJ0 459 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 CDK8P49336 464 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 BPIFB4P59827 614 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 SNAP25P60880 206 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 TFAMQ00059 246 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 MORC3Q14149 939 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 KCNJ12Q14500 433 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 LONRF3Q496Y0 759 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 DNAJC21Q5F1R6 531 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 PODNQ7Z5L7 613 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 IFT20Q8IY31 132 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 THEM5Q8N1Q8 247 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 TCP11Q8WWU5 503 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 GJA10Q969M2 543 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 NT5C1BQ96P26 610 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 LBHD1Q9BQE6 289 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 FEZ2Q9UHY8 353 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 I3L4J1 428 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 NSFP46459 744 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 OSTNP61366 133 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 STXBP2Q15833 593 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 HHATQ5VTY9 493 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 RNF139Q8WU17 664 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 FAM149B1Q96BN6 582 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 PIDD1Q9HB75 910 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 IFT122Q9HBG6 1241 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 SLC38A10Q9HBR0 1119 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 FEM1BQ9UK73 627 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 SPATA31A6Q5VVP1 1343 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 NOL3O60936 208 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 TUBBP07437 444 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 ATXN8OSP0DMR3 200 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 CACNB3P54284 484 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 SATB1Q01826 763 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 ME3Q16798 604 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 ZMYM1Q5SVZ6 1142 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 CATSPER4Q7RTX7 472 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 NLRP4Q96MN2 994 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 RBSNQ9H1K0 784 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 RPF1Q9H9Y2 349 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 LRRC4Q9HBW1 653 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 SOS2Q07890 1332 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 SRGAP2BP0DMP2 458 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 MAP7D3Q8IWC1 876 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 GRK7Q8WTQ7 553 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 DCAF4Q8WV16 495 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 KRT12Q99456 494 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 DNAJC5Q9H3Z4 198 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 HACL1Q9UJ83 578 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 GTPBP6O43824 516 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 RPN1P04843 607 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 PTGDRQ13258 359 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 FASTKD5Q7L8L6 764 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 CTAGE3PQ8IX95 158 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 TMEM206Q9H813 350 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 WDR64B1ANS9 1081 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 MED7O43513 233 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 PRKAB2O43741 272 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 IFNB1P01574 187 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 PPP2R3AQ06190 1150 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 TUBB2AQ13885 445 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 SURF1Q15526 300 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 SIX6OS1Q8N1H7 587 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 TUBB2BQ9BVA1 445 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 RIC8AQ9NPQ8 531 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 INPP5FQ9Y2H2 1132 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 TNS3Q68CZ2 1445 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 LMNB1P20700 586 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 ZNF157P51786 506 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 FAM83BQ5T0W9 1011 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 TBCKQ8TEA7 893 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 SCYL1Q96KG9 808 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 IFIH1Q9BYX4 1025 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 MAGEF1Q9HAY2 307 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 RAVER2Q9HCJ3 691 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 DBNLQ9UJU6 430 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 PNMA6FA0A0J9YX94 578 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 PFKFB1P16118 471 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 KRT15P19012 456 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 PSMC2P35998 433 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 BFSP1Q12934 665 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 RPS6KA2Q15349 733 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 SNRNP48Q6IEG0 339 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 ARMCX2Q7L311 632 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 SH3RF3Q8TEJ3 882 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 TRERF1Q96PN7 1200 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 UBN1Q9NPG3 1134 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
GAPVD1-202ENST00000297933 CCDC160A6NGH7 325 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 BTBD18B2RXH4 712 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 TNPO2O14787 897 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 FCER1AP12319 257 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 HOXA13P31271 388 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 PHBP35232 272 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 CFAP221Q4G0U5 840 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 CROCCP2Q86T23 111 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms