RNA–Protein interactions for RNA: ENST00000297598.4

PDP1-201, Transcript of pyruvate dehyrogenase phosphatase catalytic subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDP1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDP1-201ENST00000297598 THAP9Q9H5L6 903 aa16.93■□□□□ 0.3
PDP1-201ENST00000297598 A0A087X0B3 334 aa16.93■□□□□ 0.3
PDP1-201ENST00000297598 ATP2C1P98194 919 aaPredicted RBP16.93■□□□□ 0.3
PDP1-201ENST00000297598 MAN2A1Q16706 1144 aa16.93■□□□□ 0.3
PDP1-201ENST00000297598 ZNF804AQ7Z570 1209 aa16.93■□□□□ 0.3
PDP1-201ENST00000297598 ANKRD42Q8N9B4 389 aa16.93■□□□□ 0.3
PDP1-201ENST00000297598 CTTNBP2NLQ9P2B4 639 aa16.93■□□□□ 0.3
PDP1-201ENST00000297598 WDR17Q8IZU2 1322 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 PALMO75781 387 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 UFL1O94874 794 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 SLCO1A2P46721 670 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 TCP10Q12799 353 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 ERFEQ4G0M1 354 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 EFCC1Q9HA90 598 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 STK38LQ9Y2H1 464 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 TMEM94Q12767 1356 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 MEIS1O00470 390 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 SPOPO43791 374 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 FLOT1O75955 427 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 ZNF18P17022 549 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 KCTD19Q17RG1 926 aaPredicted RBP16.92■□□□□ 0.3
PDP1-201ENST00000297598 SLF2Q8IX21 1173 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 CACNA2D3Q8IZS8 1091 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 FNBP4Q8N3X1 1017 aaPredicted RBP16.92■□□□□ 0.3
PDP1-201ENST00000297598 ARMCX3Q9UH62 379 aaPredicted RBP16.92■□□□□ 0.3
PDP1-201ENST00000297598 RASAL2Q9UJF2 1139 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 NOVA2Q9UNW9 492 aaKnown RBP16.92■□□□□ 0.3
PDP1-201ENST00000297598 HLA-DOAP06340 250 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 EPB41P11171 864 aaKnown RBP16.92■□□□□ 0.3
PDP1-201ENST00000297598 VWA3BQ502W6 1294 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 RETREG2Q8NC44 543 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 KIFC2Q96AC6 838 aa16.92■□□□□ 0.3
PDP1-201ENST00000297598 ALX1Q15699 326 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 ZNF622Q969S3 477 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDP1-201ENST00000297598 ANKRD2Q9GZV1 360 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 FAM217BQ9NTX9 383 aaPredicted RBP16.91■□□□□ 0.3
PDP1-201ENST00000297598 LIMA1Q9UHB6 759 aaKnown RBP16.91■□□□□ 0.3
PDP1-201ENST00000297598 HPCAL4Q9UM19 191 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 ACTN3Q08043 901 aaPredicted RBP16.91■□□□□ 0.3
PDP1-201ENST00000297598 PABPC4Q13310 644 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDP1-201ENST00000297598 LRRC31Q6UY01 552 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 MYCBPQ99417 103 aaPredicted RBP16.91■□□□□ 0.3
PDP1-201ENST00000297598 CASP7P55210 303 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 CCDC50Q8IVM0 306 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 TCP11Q8WWU5 503 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 EHD4Q9H223 541 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 TMEM60Q9H2L4 133 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 MTRF1LQ9UGC7 380 aaKnown RBP16.91■□□□□ 0.3
PDP1-201ENST00000297598 DMGDHQ9UI17 866 aaKnown RBP16.91■□□□□ 0.3
PDP1-201ENST00000297598 TSKSQ9UJT2 592 aa16.91■□□□□ 0.3
PDP1-201ENST00000297598 RIMS1Q86UR5 1692 aaKnown RBP16.91■□□□□ 0.3
PDP1-201ENST00000297598 CLIC2O15247 247 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 XRCC5P13010 732 aaKnown RBP16.9■□□□□ 0.3
PDP1-201ENST00000297598 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
PDP1-201ENST00000297598 CALCOCO2Q13137 446 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 UBE2SQ16763 222 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 TBC1D10BQ4KMP7 808 aaPredicted RBP16.9■□□□□ 0.3
PDP1-201ENST00000297598 CCNI2Q6ZMN8 369 aaPredicted RBP16.9■□□□□ 0.3
PDP1-201ENST00000297598 GOLPH3Q9H4A6 298 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 CLTCQ00610 1675 aaKnown RBP16.9■□□□□ 0.3
PDP1-201ENST00000297598 CYP2J2P51589 502 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
PDP1-201ENST00000297598 PFKFB3Q16875 520 aaPredicted RBP16.9■□□□□ 0.3
PDP1-201ENST00000297598 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 PHF20Q9BVI0 1012 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 ABCC12Q96J65 1359 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 NR2F2P24468 414 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 CCDC105Q8IYK2 499 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 ATP8A2Q9NTI2 1148 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 TMEM260Q9NX78 707 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 CAPN11Q9UMQ6 739 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 SLC1A4P43007 532 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 IRAK1P51617 712 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 SEC24CP53992 1094 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 FKBP3Q00688 224 aaKnown RBP16.9■□□□□ 0.3
PDP1-201ENST00000297598 DHX9Q08211 1270 aaKnown RBP16.9■□□□□ 0.3
PDP1-201ENST00000297598 PRR16Q569H4 304 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 MMS22LQ6ZRQ5 1243 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 ATP6V0A2Q9Y487 856 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 CD2APQ9Y5K6 639 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 XDHP47989 1333 aa16.9■□□□□ 0.3
PDP1-201ENST00000297598 DDX39AO00148 427 aaKnown RBP16.89■□□□□ 0.29
PDP1-201ENST00000297598 H2AFZP0C0S5 128 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 EEF2P13639 858 aaKnown RBP16.89■□□□□ 0.29
PDP1-201ENST00000297598 PLCB3Q01970 1234 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 MUM1L1Q5H9M0 696 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 H2AFVQ71UI9 128 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 MYCT1Q8N699 235 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 PLAAQ9Y263 795 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 LOC102724428A0A0B4J2F2 783 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 IL6STP40189 918 aaPredicted RBP16.89■□□□□ 0.29
PDP1-201ENST00000297598 PLTPP55058 493 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 SIK1P57059 783 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 GKAP1Q5VSY0 366 aaPredicted RBP16.89■□□□□ 0.29
PDP1-201ENST00000297598 ARL6IP4Q66PJ3 421 aaKnown RBP16.89■□□□□ 0.29
PDP1-201ENST00000297598 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 NSRP1Q9H0G5 558 aaKnown RBP16.89■□□□□ 0.29
PDP1-201ENST00000297598 A6NNZ2 444 aa16.89■□□□□ 0.29
PDP1-201ENST00000297598 TUBB8Q3ZCM7 444 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms