RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 PTK2BQ14289 1009 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 NXNQ6DKJ4 435 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 HPS5Q9UPZ3 1129 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 DYSFO75923 2080 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TADA3O75528 432 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 RGS20O76081 388 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 RUNX1T1Q06455 604 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 NNTQ13423 1086 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 CEP85Q6P2H3 762 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 OTUB1Q96FW1 271 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 CDCA7LQ96GN5 454 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 CARD6Q9BX69 1037 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 ANAPC5Q9UJX4 755 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 ZNF652Q9Y2D9 606 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 ZNF330Q9Y3S2 320 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 SCN10AQ9Y5Y9 1956 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TTC21BQ7Z4L5 1316 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TRAF5O00463 557 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 BAG3O95817 575 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 HSPA2P54652 639 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TRIM16LQ309B1 348 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 MFSD6Q6ZSS7 791 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 PCGF5Q86SE9 256 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 SETD3Q86TU7 594 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 WDR60Q8WVS4 1066 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TADA1Q96BN2 335 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 PANX2Q96RD6 677 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 STX18Q9P2W9 335 aaKnown RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 INTUQ9ULD6 942 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 ZNF644Q9H582 1327 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 A0A0B4J269 797 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TNNC2P02585 160 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 SOX6P35712 828 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TUBB3Q13509 450 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 ARHGAP22Q7Z5H3 698 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 CRLF3Q8IUI8 442 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 CCDC105Q8IYK2 499 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 SGSM3Q96HU1 749 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TM6SF1Q9BZW5 370 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 RNF216Q9NWF9 866 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 H7C1D1 291 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 KPNA4O00629 521 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 IKBKBO14920 756 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 EIF3HO15372 352 aaKnown RBP eCLIP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 ZBTB43O43298 467 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 ATXN3P54252 364 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 KRT81Q14533 505 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 BBS9Q3SYG4 887 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 ZNF229Q9UJW7 825 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TRIOBPQ9H2D6 2365 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 PRR23D1E9PI22 279 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 PRR23D2P0DMB1 279 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 TBC1D8BQ0IIM8 1120 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 DNAL1Q4LDG9 190 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 NOSTRINQ8IVI9 506 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 RASSF5Q8WWW0 418 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 CHMP2BQ9UQN3 213 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 MEFVO15553 781 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 CDC27P30260 824 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 PCNX4Q63HM2 1172 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 HIBCHQ6NVY1 386 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 CNNM1Q9NRU3 951 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 DDX28Q9NUL7 540 aaKnown RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 SCAF11Q99590 1463 aaKnown RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 GSTA1P08263 222 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 RPSAP08865 295 aaKnown RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 PSMD2Q13200 908 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 ART3Q13508 389 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 SSH1Q8WYL5 1049 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 OTULINQ96BN8 352 aa5.24□□□□□ -1.57
CSMD3-201ENST00000297405 NAF1Q96HR8 494 aaKnown RBP5.24□□□□□ -1.57
CSMD3-201ENST00000297405 H0YCG3 227 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 KRT76Q01546 638 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 FCHO2Q0JRZ9 810 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 TRADDQ15628 312 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 FAM133BQ5BKY9 247 aaKnown RBP5.23□□□□□ -1.57
CSMD3-201ENST00000297405 ZNF513Q8N8E2 541 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-201ENST00000297405 KIFC2Q96AC6 838 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 CLEC4MQ9H2X3 399 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-201ENST00000297405 TMEM245Q9H330 911 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 CCDC134Q9H6E4 229 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 ATP6V1HQ9UI12 483 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 EXOC7Q9UPT5 735 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 CACNA1SQ13698 1873 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 M0R3G1 203 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 IRX5P78411 483 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-201ENST00000297405 RIN3Q8TB24 985 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 BRF1Q92994 677 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 KLHL31Q9H511 634 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 ORC3Q9UBD5 711 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-201ENST00000297405 CARD8Q9Y2G2 431 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 GMNCA6NCL1 334 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 SEMA3EO15041 775 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 ESRRAP11474 423 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-201ENST00000297405 MAP4P27816 1152 aaKnown RBP5.23□□□□□ -1.57
CSMD3-201ENST00000297405 WDR44Q5JSH3 913 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 OLFML2BQ68BL8 750 aa5.23□□□□□ -1.57
CSMD3-201ENST00000297405 PATL1Q86TB9 770 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms