RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ZNF658Q5TYW1 1059 aaPredicted RBP10.4□□□□□ -0.74
PRDM9-201ENST00000296682 NYAP1Q6ZVC0 841 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 CACNA2D4Q7Z3S7 1137 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 TC2NQ8N9U0 490 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 STK32BQ9NY57 414 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 GJA3Q9Y6H8 435 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 TNS1Q9HBL0 1735 aaKnown RBP10.4□□□□□ -0.74
PRDM9-201ENST00000296682 KLRG2A4D1S0 409 aaPredicted RBP10.4□□□□□ -0.74
PRDM9-201ENST00000296682 F5H6K3 240 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 RHOXF2BP0C7M4 288 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 CYP27A1Q02318 531 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 SP4Q02446 784 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 KLRC3Q07444 240 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 PABPC4Q13310 644 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRDM9-201ENST00000296682 SKIDA1Q1XH10 827 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 QRICH1Q2TAL8 776 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 CRY2Q49AN0 593 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 CHP1Q99653 195 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 RHOXF2Q9BQY4 288 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 PLEKHA4Q9H4M7 779 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 ZBTB7AO95365 584 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 DLGAP5Q15398 846 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 SH3RF1Q7Z6J0 888 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 CAGE1Q8TC20 777 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 PI4KBQ9UBF8 816 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 SAMM50Q9Y512 469 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 CDC37Q16543 378 aaPredicted RBP10.39□□□□□ -0.75
PRDM9-201ENST00000296682 APOBEC3HQ6NTF7 200 aaKnown RBP10.39□□□□□ -0.75
PRDM9-201ENST00000296682 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 M0R2N6 131 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 KIF2AO00139 706 aaPredicted RBP10.39□□□□□ -0.75
PRDM9-201ENST00000296682 ECE1P42892 770 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 TCP11X2Q5H9J9 407 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 TUBGCP2Q9BSJ2 902 aa10.39□□□□□ -0.75
PRDM9-201ENST00000296682 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRDM9-201ENST00000296682 ZNF543Q08ER8 600 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 PRAMEF18Q5VWM3 479 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 ARL6IP4Q66PJ3 421 aaKnown RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 PDXDC2PQ6P474 469 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 RAD9BQ6WBX8 426 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 SMCR8Q8TEV9 937 aaPredicted RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 ZMYND12Q9H0C1 365 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 MRPL44Q9H9J2 332 aaKnown RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 TRIM10Q9UDY6 481 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 PNMA6FA0A0J9YX94 578 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 ECM2O94769 699 aaPredicted RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 SHMT1P34896 483 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 SPAG1Q07617 926 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 SEMA3FQ13275 785 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 NR1I3Q14994 352 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 ASPRV1Q53RT3 343 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 ANKRD40Q6AI12 368 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 ZNF771Q7L3S4 317 aaPredicted RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 PODNQ7Z5L7 613 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 GLIS3Q8NEA6 775 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 ANKRD7Q92527 254 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 PYM1Q9BRP8 204 aaKnown RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 TCEAL9Q9UHQ7 104 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 POTEB3A0JP26 581 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 POTECB2RU33 542 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 AKR1B10O60218 316 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 MRPS25P82663 173 aaKnown RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 POTEBQ6S5H4 581 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 CCDC155Q8N6L0 562 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 RDH13Q8NBN7 331 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 LARP4BQ92615 738 aaKnown RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 CNOT6LQ96LI5 555 aaKnown RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 CCDC43Q96MW1 224 aaKnown RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 GDAP1L1Q96MZ0 367 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 ADD3Q9UEY8 706 aaKnown RBP10.38□□□□□ -0.75
PRDM9-201ENST00000296682 PLIN4Q96Q06 1357 aa10.38□□□□□ -0.75
PRDM9-201ENST00000296682 RNF225M0QZC1 329 aaPredicted RBP10.37□□□□□ -0.75
PRDM9-201ENST00000296682 ABL1P00519 1130 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 RNASE9P60153 205 aaKnown RBP10.37□□□□□ -0.75
PRDM9-201ENST00000296682 MTERF4Q7Z6M4 381 aaKnown RBP10.37□□□□□ -0.75
PRDM9-201ENST00000296682 CNGA4Q8IV77 575 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 TPH2Q8IWU9 490 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 DDX12PQ92771 950 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 SPZ1Q9BXG8 430 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 TTC26A0AVF1 554 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 ZBTB5O15062 677 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 STX10O60499 249 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 SEC31AO94979 1220 aaKnown RBP10.37□□□□□ -0.75
PRDM9-201ENST00000296682 HOXA10P31260 410 aaPredicted RBP10.37□□□□□ -0.75
PRDM9-201ENST00000296682 NAALADL2Q58DX5 795 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 CCDC122Q5T0U0 273 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 FBXO11Q86XK2 927 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 CYP2W1Q8TAV3 490 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 ACER1Q8TDN7 264 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 TBC1D5Q92609 795 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 TRIM9Q9C026 710 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 JADE2Q9NQC1 790 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 SH3GLB2Q9NR46 395 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 AGPAT5Q9NUQ2 364 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 ZHX1Q9UKY1 873 aaPredicted RBP10.37□□□□□ -0.75
PRDM9-201ENST00000296682 POTEFA5A3E0 1075 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 PSDA5PKW4 1024 aaPredicted RBP10.37□□□□□ -0.75
PRDM9-201ENST00000296682 MYMKA6NI61 221 aa10.37□□□□□ -0.75
PRDM9-201ENST00000296682 POTEIP0CG38 1075 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms