RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MAN1B1Q9UKM7 699 aa17.55■□□□□ 0.4
LSM6-201ENST00000296581 WDR90Q96KV7 1748 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 GLTPD2A6NH11 291 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 AP5Z1O43299 807 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 ZSCAN20P17040 1043 aaPredicted RBP17.54■□□□□ 0.4
LSM6-201ENST00000296581 HOXA13P31271 388 aaPredicted RBP17.54■□□□□ 0.4
LSM6-201ENST00000296581 EPHX2P34913 555 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 PDIA5Q14554 519 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 TMEM266Q2M3C6 531 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 CCDC39Q9UFE4 941 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 GCOM1H8Y6P7 765 aaPredicted RBP17.54■□□□□ 0.4
LSM6-201ENST00000296581 FLOT1O75955 427 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 SMC2O95347 1197 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 CYP3A4P08684 503 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 POLR2MP0CAP2 368 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 FDX1P10109 184 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 CIITAP33076 1130 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 STAT6P42226 847 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 MAP3K9P80192 1104 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 DPYDQ12882 1025 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 MORC3Q14149 939 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 NAALADL2Q58DX5 795 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
LSM6-201ENST00000296581 DLK2Q6UY11 383 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.54■□□□□ 0.4
LSM6-201ENST00000296581 KRT26Q7Z3Y9 468 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 CABP7Q86V35 215 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 SNCAIPQ9Y6H5 919 aa17.54■□□□□ 0.4
LSM6-201ENST00000296581 ADCY5O95622 1261 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 BMP6P22004 513 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 AFMP43652 599 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 RRAGBQ5VZM2 374 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 TBC1D5Q92609 795 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 AGBL1Q96MI9 1066 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 MTRQ99707 1265 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 ARID3AQ99856 593 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 MMTAG2Q9BU76 263 aaKnown RBP17.53■□□□□ 0.4
LSM6-201ENST00000296581 RAB34Q9BZG1 259 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 KCNMB3Q9NPA1 279 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 CCPG1Q9ULG6 757 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 R3HCC1Q9Y3T6 440 aaKnown RBP17.53■□□□□ 0.4
LSM6-201ENST00000296581 AFG3L2Q9Y4W6 797 aa17.53■□□□□ 0.4
LSM6-201ENST00000296581 GTPBP6O43824 516 aaPredicted RBP17.52■□□□□ 0.4
LSM6-201ENST00000296581 CFBP00751 764 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 GHRHRQ02643 423 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 Q4G0T1 1027 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 ISM2Q6H9L7 571 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 CUEDC2Q9H467 287 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 PNMA2Q9UL42 364 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 GOLGA6L19H0YKK7 550 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 PPP1R12BO60237 982 aaPredicted RBP17.52■□□□□ 0.4
LSM6-201ENST00000296581 HMGCS2P54868 508 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 PRKG1Q13976 671 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 VGLL4Q14135 290 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 GSDMAQ96QA5 445 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 TTC12Q9H892 705 aaPredicted RBP17.52■□□□□ 0.4
LSM6-201ENST00000296581 LRWD1Q9UFC0 647 aa17.52■□□□□ 0.4
LSM6-201ENST00000296581 PTPRFP10586 1907 aa17.52■□□□□ 0.39
LSM6-201ENST00000296581 RBBP6Q7Z6E9 1792 aaKnown RBP17.52■□□□□ 0.39
LSM6-201ENST00000296581 UQCRHLA0A096LP55 91 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 BECN2A8MW95 431 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 UQCRHP07919 91 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 HSD17B4P51659 736 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 SH3D19Q5HYK7 790 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 AOPEPQ8N6M6 819 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 MAGEF1Q9HAY2 307 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 TBX3O15119 743 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 RASSF8Q8NHQ8 419 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 LENG9Q96B70 501 aa17.51■□□□□ 0.39
LSM6-201ENST00000296581 IKBKBO14920 756 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 ZBED4O75132 1171 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 PLCG1P19174 1290 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 MSNP26038 577 aaKnown RBP17.5■□□□□ 0.39
LSM6-201ENST00000296581 FCHSD1Q86WN1 690 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 MLKLQ8NB16 471 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 RBM46Q8TBY0 533 aaKnown RBP17.5■□□□□ 0.39
LSM6-201ENST00000296581 LRRC15Q8TF66 581 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 CDCA5Q96FF9 252 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 TAF1DQ9H5J8 278 aaPredicted RBP17.5■□□□□ 0.39
LSM6-201ENST00000296581 KBTBD4Q9NVX7 518 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 TMEM51Q9NW97 253 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 VWA5AO00534 786 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 MYL1P05976 194 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 CASP1P29466 404 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 NCAPHQ15003 741 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 SARM1Q6SZW1 724 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 SLFN12Q8IYM2 578 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 ETNPPLQ8TBG4 499 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 CALML4Q96GE6 196 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 EHMT1Q9H9B1 1298 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 RAVER2Q9HCJ3 691 aaKnown RBP17.5■□□□□ 0.39
LSM6-201ENST00000296581 TMOD4Q9NZQ9 345 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 PCDHA12Q9UN75 941 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 ADAMTS5Q9UNA0 930 aa17.5■□□□□ 0.39
LSM6-201ENST00000296581 COL11A1P12107 1806 aaPredicted RBP17.49■□□□□ 0.39
LSM6-201ENST00000296581 IQCA1LA6NCM1 817 aa17.49■□□□□ 0.39
LSM6-201ENST00000296581 POTEMA6NI47 508 aa17.49■□□□□ 0.39
LSM6-201ENST00000296581 FAM86B1E9PN63 330 aa17.49■□□□□ 0.39
LSM6-201ENST00000296581 DYNC1I1O14576 645 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms