RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 CT47A1Q5JQC4 288 aaPredicted RBP17.09■□□□□ 0.33
CAPN2-201ENST00000295006 FBXO33Q7Z6M2 555 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
CAPN2-201ENST00000295006 LRRC1Q9BTT6 524 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 KIAA1024Q9UPX6 916 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 GOLGA6L10A6NI86 522 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 VAV2P52735 878 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 NPY5RQ15761 445 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 TRIM58Q8NG06 486 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 PCDHA12Q9UN75 941 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 SLURP2P0DP57 97 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 APBA1Q02410 837 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 GUCY2DQ02846 1103 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 TRAPPC3LQ5T215 181 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 ADAT2Q7Z6V5 191 aaKnown RBP17.09■□□□□ 0.33
CAPN2-201ENST00000295006 DDX12PQ92771 950 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 ADAMTS1Q9UHI8 967 aa17.09■□□□□ 0.33
CAPN2-201ENST00000295006 DOK7Q18PE1 504 aa17.08■□□□□ 0.33
CAPN2-201ENST00000295006 NAALADL2Q58DX5 795 aa17.08■□□□□ 0.33
CAPN2-201ENST00000295006 IRF2BP1Q8IU81 584 aa17.08■□□□□ 0.33
CAPN2-201ENST00000295006 NOX5Q96PH1 765 aa17.08■□□□□ 0.33
CAPN2-201ENST00000295006 GOPCQ9HD26 462 aa17.08■□□□□ 0.33
CAPN2-201ENST00000295006 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.33
CAPN2-201ENST00000295006 REXO2Q9Y3B8 237 aaKnown RBP17.08■□□□□ 0.33
CAPN2-201ENST00000295006 CHMP2AO43633 222 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 TUBB4BP68371 445 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 KLHL30Q0D2K2 578 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 KIAA0753Q2KHM9 967 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 HDAC7Q8WUI4 952 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 TBC1D5Q92609 795 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 CAPN6Q9Y6Q1 641 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 KCPQ6ZWJ8 1503 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 ITIH6Q6UXX5 1313 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 STXBP3O00186 592 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 USP8P40818 1118 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 CACNB3P54284 484 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 GRM4Q14833 912 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 VWA3BQ502W6 1294 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 CFAP58Q5T655 872 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 MYOCDQ8IZQ8 938 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 BCAS4Q8TDM0 211 aa17.08■□□□□ 0.32
CAPN2-201ENST00000295006 N4BP2Q86UW6 1770 aaPredicted RBP17.07■□□□□ 0.32
CAPN2-201ENST00000295006 MYH2Q9UKX2 1941 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 KIAA0754O94854 1291 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 TUBBP07437 444 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 GNGT1P63211 74 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 GIMAP8Q8ND71 665 aaPredicted RBP17.07■□□□□ 0.32
CAPN2-201ENST00000295006 GLIS3Q8NEA6 775 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 GOLPH3Q9H4A6 298 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 NPHP3-ACAD11A0A0J9YXS1 232 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 MYMKA6NI61 221 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 PBX1P40424 430 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 LIG3P49916 1009 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 SFMBT2Q5VUG0 894 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 TTBK2Q6IQ55 1244 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 TTI2Q6NXR4 508 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 CCDC84Q86UT8 332 aaPredicted RBP17.07■□□□□ 0.32
CAPN2-201ENST00000295006 FAM133AQ8N9E0 248 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 KRT12Q99456 494 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 TSGA10Q9BZW7 698 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 PANK4Q9NVE7 773 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 GGA1Q9UJY5 639 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 SMIM23A6NLE4 172 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L19D6RCP7 530 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L20D6RJB6 530 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 E9PMD0 336 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 EBAG9O00559 213 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 NKRFO15226 690 aaKnown RBP eCLIP17.07■□□□□ 0.32
CAPN2-201ENST00000295006 CEP104O60308 925 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 SRGNP10124 158 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L24Q0WX57 530 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 SF3B3Q15393 1217 aaKnown RBP17.07■□□□□ 0.32
CAPN2-201ENST00000295006 USP17L6PQ6QN14 398 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 MAEAQ7L5Y9 396 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 GPBP1Q86WP2 473 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 CERS3Q8IU89 383 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 EPB41L5Q9HCM4 733 aa17.07■□□□□ 0.32
CAPN2-201ENST00000295006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.07■□□□□ 0.32
CAPN2-201ENST00000295006 ABCC6O95255 1503 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 ATRNO75882 1429 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 FAM26FQ5R3K3 315 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
CAPN2-201ENST00000295006 NAA35Q5VZE5 725 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 WDR59Q6PJI9 974 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 RDH13Q8NBN7 331 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 DDX25Q9UHL0 483 aaKnown RBP17.06■□□□□ 0.32
CAPN2-201ENST00000295006 DMGDHQ9UI17 866 aaKnown RBP17.06■□□□□ 0.32
CAPN2-201ENST00000295006 PCDHB13Q9Y5F0 798 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 RHOBTB3O94955 611 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 TNFRSF25Q93038 417 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 PKD2L1Q9P0L9 805 aa17.06■□□□□ 0.32
CAPN2-201ENST00000295006 PDE2AO00408 941 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms