RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 LARP4BQ92615 738 aaKnown RBP15.68■□□□□ 0.1
NXF1-201ENST00000294172 DHTKD1Q96HY7 919 aaPredicted RBP15.68■□□□□ 0.1
NXF1-201ENST00000294172 MAGEC2Q9UBF1 373 aaPredicted RBP15.68■□□□□ 0.1
NXF1-201ENST00000294172 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
NXF1-201ENST00000294172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.68■□□□□ 0.12e-9■■■□□ 18.9
NXF1-201ENST00000294172 ATRNL1Q5VV63 1379 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 MYMKA6NI61 221 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 NCBP1Q09161 790 aaKnown RBP15.67■□□□□ 0.1
NXF1-201ENST00000294172 SEMA3FQ13275 785 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 TTI2Q6NXR4 508 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 GMCL1P1Q8NEA9 526 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 GLT8D2Q9H1C3 349 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 SLC39A2Q9NP94 309 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 STK17AQ9UEE5 414 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 ZNF215Q9UL58 517 aaPredicted RBP15.67■□□□□ 0.1
NXF1-201ENST00000294172 PCDHA12Q9UN75 941 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 BMP3P12645 472 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 GCFC2P16383 781 aaKnown RBP15.67■□□□□ 0.1
NXF1-201ENST00000294172 TAL1P17542 331 aaPredicted RBP15.67■□□□□ 0.1
NXF1-201ENST00000294172 DLGAP5Q15398 846 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 CNNM4Q6P4Q7 775 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 CNGA4Q8IV77 575 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 RTKN2Q8IZC4 609 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 OGFOD1Q8N543 542 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 P2RX5Q93086 422 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 GMCL1Q96IK5 515 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 AMNQ9BXJ7 453 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 ANO3Q9BYT9 981 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 THAP9Q9H5L6 903 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.67■□□□□ 0.13e-8■■■■□ 20
NXF1-201ENST00000294172 V9GYY5 206 aaPredicted RBP15.67■□□□□ 0.1
NXF1-201ENST00000294172 ITIH6Q6UXX5 1313 aa15.67■□□□□ 0.1
NXF1-201ENST00000294172 A0A1W2PRG0 241 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 TUBB4AP04350 444 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 SYDE2Q5VT97 1194 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 ANKRD40Q6AI12 368 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 TRIM65Q6PJ69 517 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 KCNK18Q7Z418 384 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 RAD54LQ92698 747 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 IDEP14735 1019 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 DPEP1P16444 411 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 EEF1GP26641 437 aaKnown RBP15.66■□□□□ 0.1
NXF1-201ENST00000294172 ECM1Q16610 540 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 DEFB132Q7Z7B7 95 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 FBXO11Q86XK2 927 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 KIAA0895Q8NCT3 520 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 DUSP9Q99956 384 aaKnown RBP15.66■□□□□ 0.1
NXF1-201ENST00000294172 VEZTQ9HBM0 779 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 ZNF70Q9UC06 446 aaPredicted RBP15.66■□□□□ 0.1
NXF1-201ENST00000294172 HDAC9Q9UKV0 1011 aa15.66■□□□□ 0.1
NXF1-201ENST00000294172 ZNF646O15015 1829 aaPredicted RBP15.65■□□□□ 0.1
NXF1-201ENST00000294172 BICDL2A1A5D9 508 aa15.65■□□□□ 0.1
NXF1-201ENST00000294172 RNF225M0QZC1 329 aaPredicted RBP15.65■□□□□ 0.1
NXF1-201ENST00000294172 MEIS2O14770 477 aa15.65■□□□□ 0.1
NXF1-201ENST00000294172 CCNE1P24864 410 aa15.65■□□□□ 0.1
NXF1-201ENST00000294172 ECE1P42892 770 aa15.65■□□□□ 0.1
NXF1-201ENST00000294172 RAD9BQ6WBX8 426 aa15.65■□□□□ 0.1
NXF1-201ENST00000294172 NAA15Q9BXJ9 866 aaKnown RBP15.65■□□□□ 0.1
NXF1-201ENST00000294172 MYH7BA7E2Y1 1941 aa15.65■□□□□ 0.1
NXF1-201ENST00000294172 RGPD3A6NKT7 1758 aaPredicted RBP15.65■□□□□ 0.1
NXF1-201ENST00000294172 RGPD4Q7Z3J3 1758 aa15.65■□□□□ 0.1
NXF1-201ENST00000294172 SLU7O95391 586 aaKnown RBP15.65■□□□□ 0.1
NXF1-201ENST00000294172 SSBP05455 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
NXF1-201ENST00000294172 ANKRD7Q92527 254 aa15.65■□□□□ 0.1
NXF1-201ENST00000294172 NAP1L4Q99733 375 aaKnown RBP15.65■□□□□ 0.1
NXF1-201ENST00000294172 CCDC94Q9BW85 323 aaPredicted RBP15.65■□□□□ 0.1
NXF1-201ENST00000294172 HERC5Q9UII4 1024 aaKnown RBP15.65■□□□□ 0.1
NXF1-201ENST00000294172 PHLPP2Q6ZVD8 1323 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 GOLGA6L9A6NEM1 432 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 LGALS16A8MUM7 142 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 VIL1P09327 827 aaKnown RBP15.64■□□□□ 0.09
NXF1-201ENST00000294172 CCDC175P0C221 793 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 GNG11P61952 73 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 TMEM119Q4V9L6 283 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 UNC13DQ70J99 1090 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 MB21D1Q8N884 522 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 NOC3LQ8WTT2 800 aaKnown RBP15.64■□□□□ 0.09
NXF1-201ENST00000294172 DDX12PQ92771 950 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 PSMD1Q99460 953 aa15.64■□□□□ 0.09
NXF1-201ENST00000294172 P2RX7Q99572 595 aaKnown RBP15.64■□□□□ 0.09
NXF1-201ENST00000294172 B4DLN1 442 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 USP11P51784 963 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 PRR16Q569H4 304 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 PDCL2Q8N4E4 241 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 ACER1Q8TDN7 264 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 CCDC51Q96ER9 411 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 TUBGCP2Q9BSJ2 902 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 MRPL44Q9H9J2 332 aaKnown RBP15.63■□□□□ 0.09
NXF1-201ENST00000294172 ABHD10Q9NUJ1 306 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 PVALEFA0A1B0GWK0 134 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 SPDYE3A6NKU9 549 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 FANCGO15287 622 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 URI1O94763 535 aaPredicted RBP15.63■□□□□ 0.09
NXF1-201ENST00000294172 HOXA13P31271 388 aaPredicted RBP15.63■□□□□ 0.09
NXF1-201ENST00000294172 KRT9P35527 623 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 ARHGAP4P98171 946 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 AP3B2Q13367 1082 aa15.63■□□□□ 0.09
NXF1-201ENST00000294172 TRIM14Q14142 442 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms