RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 XRCC5P13010 732 aaKnown RBP13.5□□□□□ -0.25
SLX4-201ENST00000294008 FBXW10Q5XX13 1052 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 RNF207Q6ZRF8 634 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 MCF2L2Q86YR7 1114 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 ADCK2Q7Z695 626 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 ARHGAP18Q8N392 663 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 CPA1P15085 419 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 TIMM10P62072 90 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 ATG16L1Q676U5 607 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 TADA2BQ86TJ2 420 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.49□□□□□ -0.25
SLX4-201ENST00000294008 SYCE1LA8MT33 242 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
SLX4-201ENST00000294008 DARS2Q6PI48 645 aaKnown RBP13.49□□□□□ -0.25
SLX4-201ENST00000294008 TMTC3Q6ZXV5 915 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 SMCO2A6NFE2 343 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 CLTAP09496 248 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 RRM2BQ7LG56 351 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 TRMT44Q8IYL2 757 aaKnown RBP13.49□□□□□ -0.25
SLX4-201ENST00000294008 TEKT3Q9BXF9 490 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 AK2P54819 239 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 BRAPQ7Z569 592 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 PATL1Q86TB9 770 aaKnown RBP13.49□□□□□ -0.25
SLX4-201ENST00000294008 KCTD6Q8NC69 237 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 PAWRQ96IZ0 340 aaKnown RBP13.49□□□□□ -0.25
SLX4-201ENST00000294008 TRIM4Q9C037 500 aa13.49□□□□□ -0.25
SLX4-201ENST00000294008 AGRPO00253 132 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 CHEK2O96017 543 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 CYP4A11Q02928 519 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 TEX2Q8IWB9 1127 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 SCYL3Q8IZE3 742 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 IFT43Q96FT9 208 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 CARD6Q9BX69 1037 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 PANK4Q9NVE7 773 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 DNAJC6O75061 913 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 MTMR3Q13615 1198 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.48□□□□□ -0.25
SLX4-201ENST00000294008 FBXO11Q86XK2 927 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 TRIML2Q8N7C3 387 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 NAF1Q96HR8 494 aaKnown RBP13.48□□□□□ -0.25
SLX4-201ENST00000294008 DRC3Q9H069 523 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 SPATS2LQ9NUQ6 558 aaKnown RBP13.48□□□□□ -0.25
SLX4-201ENST00000294008 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 RSPH10B2B2RC85 870 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 RSPH10BP0C881 870 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 NFKBIAP25963 317 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 TFAP4Q01664 338 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 TBL3Q12788 808 aaKnown RBP13.48□□□□□ -0.25
SLX4-201ENST00000294008 CCDC90BQ9GZT6 254 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 KCNH3Q9ULD8 1083 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 NDUFB9Q9Y6M9 179 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 IMPDH2P12268 514 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 CD58P19256 250 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 PPP1R2P41236 205 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 BASP1P80723 227 aaKnown RBP13.48□□□□□ -0.25
SLX4-201ENST00000294008 PCGF5Q86SE9 256 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 HSPH1Q92598 858 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 VPS54Q9P1Q0 977 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 NBNO60934 754 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 SEMA3FQ13275 785 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 STXBP2Q15833 593 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 KSR2Q6VAB6 950 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 IWS1Q96ST2 819 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 LBHD1Q9BQE6 289 aaPredicted RBP13.48□□□□□ -0.25
SLX4-201ENST00000294008 TRIM45Q9H8W5 580 aaPredicted RBP13.48□□□□□ -0.25
SLX4-201ENST00000294008 STX18Q9P2W9 335 aaKnown RBP13.48□□□□□ -0.25
SLX4-201ENST00000294008 IL16Q14005 1332 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 ARL4AP40617 200 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 KRT25Q7Z3Z0 450 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 FAM178BQ8IXR5 827 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 GIPC2Q8TF65 315 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 CALN1Q9BXU9 219 aa13.48□□□□□ -0.25
SLX4-201ENST00000294008 SKIP12755 728 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 MESDQ14696 234 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 PLA2G4DQ86XP0 818 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 MAP7D3Q8IWC1 876 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 ZNF507Q8TCN5 953 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 ESYT1Q9BSJ8 1104 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 MAN1C1Q9NR34 630 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 HPCAL4Q9UM19 191 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 TMCC1O94876 653 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 OR6B2Q6IFH4 312 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 TMEM106CQ9BVX2 250 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 DENND3A2RUS2 1198 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 PPARGP37231 505 aaPredicted RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 RBBP7Q16576 425 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 DHX32Q7L7V1 743 aaKnown RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 HIPK4Q8NE63 616 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 ENOX1Q8TC92 643 aaKnown RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 ZBTB18Q99592 522 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 MIS12Q9H081 205 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 PSTPIP2Q9H939 334 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 TRPC7Q9HCX4 862 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 HYOU1Q9Y4L1 999 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 RUSC2Q8N2Y8 1516 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 MOCS3O95396 460 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms