RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PDE4DQ08499 809 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 GRM4Q14833 912 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 KCNA10Q16322 511 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 TMEM63BQ5T3F8 832 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 CASC1Q6TDU7 716 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 SLC39A5Q6ZMH5 540 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 TLK2Q86UE8 772 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 FBXO11Q86XK2 927 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 ANKS1AQ92625 1134 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 TCEANC2Q96MN5 208 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 KATNBL1Q9H079 304 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 JMJD4Q9H9V9 463 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 PRKAG2Q9UGJ0 569 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 MAD2L2Q9UI95 211 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 PHF24Q9UPV7 400 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 ABCB11O95342 1321 aa11.37□□□□□ -0.59
CCDC58-201ENST00000291458 DUSP11O75319 330 aaKnown RBP11.37□□□□□ -0.59
CCDC58-201ENST00000291458 SMPD1P17405 629 aa11.37□□□□□ -0.59
CCDC58-201ENST00000291458 NT5C2P49902 561 aa11.37□□□□□ -0.59
CCDC58-201ENST00000291458 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC58-201ENST00000291458 ACLYP53396 1101 aa11.37□□□□□ -0.59
CCDC58-201ENST00000291458 CATIPQ7Z7H3 387 aa11.37□□□□□ -0.59
CCDC58-201ENST00000291458 TBC1D5Q92609 795 aa11.37□□□□□ -0.59
CCDC58-201ENST00000291458 PIGSQ96S52 555 aa11.37□□□□□ -0.59
CCDC58-201ENST00000291458 UBE2OQ9C0C9 1292 aaKnown RBP11.37□□□□□ -0.59
CCDC58-201ENST00000291458 SPC25Q9HBM1 224 aa11.37□□□□□ -0.59
CCDC58-201ENST00000291458 STARD7Q9NQZ5 370 aa11.37□□□□□ -0.59
CCDC58-201ENST00000291458 ADD3Q9UEY8 706 aaKnown RBP11.37□□□□□ -0.59
CCDC58-201ENST00000291458 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 SH2B2O14492 632 aaPredicted RBP11.36□□□□□ -0.59
CCDC58-201ENST00000291458 PPP1R11O60927 126 aaPredicted RBP11.36□□□□□ -0.59
CCDC58-201ENST00000291458 CFBP00751 764 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 EIF2AK2P19525 551 aaKnown RBP11.36□□□□□ -0.59
CCDC58-201ENST00000291458 TLE2Q04725 743 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 SLC35G1Q2M3R5 365 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 GNASQ5JWF2 1037 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 SH3RF1Q7Z6J0 888 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 LBHD1Q9BQE6 289 aaPredicted RBP11.36□□□□□ -0.59
CCDC58-201ENST00000291458 AP5M1Q9H0R1 490 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 LY9Q9HBG7 655 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 COL20A1Q9P218 1284 aa11.36□□□□□ -0.59
CCDC58-201ENST00000291458 KIAA1217Q5T5P2 1943 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 PALM3A6NDB9 673 aaPredicted RBP11.35□□□□□ -0.59
CCDC58-201ENST00000291458 DYNC1LI2O43237 492 aaPredicted RBP11.35□□□□□ -0.59
CCDC58-201ENST00000291458 SORBS3O60504 671 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 ASGR1P07306 291 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 HOXA13P31271 388 aaPredicted RBP11.35□□□□□ -0.59
CCDC58-201ENST00000291458 CHMP4BP1P59074 171 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 MICU3Q86XE3 530 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 CTCFLQ8NI51 663 aaPredicted RBP11.35□□□□□ -0.59
CCDC58-201ENST00000291458 PPP1R13LQ8WUF5 828 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 COPS5Q92905 334 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 AMNQ9BXJ7 453 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 UPF3AQ9H1J1 476 aaKnown RBP11.35□□□□□ -0.59
CCDC58-201ENST00000291458 VTA1Q9NP79 307 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 PDLIM7Q9NR12 457 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 PNMA2Q9UL42 364 aa11.35□□□□□ -0.59
CCDC58-201ENST00000291458 NAP1L2Q9ULW6 460 aaPredicted RBP11.35□□□□□ -0.59
CCDC58-201ENST00000291458 MRPL11Q9Y3B7 192 aaKnown RBP11.35□□□□□ -0.59
CCDC58-201ENST00000291458 hCG_1642624A0A1W2PR95 340 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 SOX1O00570 391 aaPredicted RBP11.34□□□□□ -0.59
CCDC58-201ENST00000291458 ZBTB5O15062 677 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 PLEKHA8P1O95397 391 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 MYL3P08590 195 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 CLTBP09497 229 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 MCM5P33992 734 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 GJA9P57773 515 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 PSMC6P62333 389 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 PPP2R5BQ15173 497 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 FSCN1Q16658 493 aaKnown RBP11.34□□□□□ -0.59
CCDC58-201ENST00000291458 ARHGEF16Q5VV41 709 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 TAPT1Q6NXT6 567 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 CXCL17Q6UXB2 119 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 SEPT14Q6ZU15 432 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 CMTR1Q8N1G2 835 aaKnown RBP11.34□□□□□ -0.59
CCDC58-201ENST00000291458 PCSK9Q8NBP7 692 aaKnown RBP11.34□□□□□ -0.59
CCDC58-201ENST00000291458 KLHDC9Q8NEP7 349 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 OR6J1Q8NGC5 347 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 SYTL5Q8TDW5 730 aaPredicted RBP11.34□□□□□ -0.59
CCDC58-201ENST00000291458 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 BADQ92934 168 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 LRCH3Q96II8 777 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 GLT1D1Q96MS3 346 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 MPHOSPH6Q99547 160 aaKnown RBP11.34□□□□□ -0.59
CCDC58-201ENST00000291458 GDF15Q99988 308 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 WDR11Q9BZH6 1224 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 PRO3102Q9H379 93 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 GNEQ9Y223 722 aaKnown RBP11.34□□□□□ -0.59
CCDC58-201ENST00000291458 PCDHA1Q9Y5I3 950 aa11.34□□□□□ -0.59
CCDC58-201ENST00000291458 A0A0U1RQG5 324 aaPredicted RBP11.33□□□□□ -0.6
CCDC58-201ENST00000291458 TRIM43BA6NCK2 446 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 MOXD2PA6NHM9 499 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 CTAGE5O15320 804 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 CYTH3O43739 400 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 DDAH1O94760 285 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 MYCLP12524 364 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms