RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RASSF7Q02833 373 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 RASA3Q14644 834 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 ARID5BQ14865 1188 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 GKAP1Q5VSY0 366 aaPredicted RBP12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 SPICE1Q8N0Z3 855 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 ARHGEF2Q92974 986 aaKnown RBP12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 OTUD5Q96G74 571 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 ZNF70Q9UC06 446 aaPredicted RBP12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 BICDL2A1A5D9 508 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 GH2P01242 217 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 CYP2E1P05181 493 aaPredicted RBP12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 YY1P25490 414 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 PRPHP41219 470 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 HUNKP57058 714 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 CUL4AQ13619 759 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 RILPL1Q5EBL4 403 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 ADALQ6DHV7 355 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 GALNT17Q6IS24 598 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 DDX12PQ92771 950 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 NBPF3Q9H094 633 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 A0A087WWV3 80 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 hCG_1984214I3L0E3 225 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 FAM13AO94988 1023 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 MAGEA1P43355 309 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 CALCOCO2Q13137 446 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 PAF1Q8N7H5 531 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 ZNF713Q8N859 430 aaPredicted RBP12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 NAP1L3Q99457 506 aaPredicted RBP12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 PSMD1Q99460 953 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 SLC24A3Q9HC58 644 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 FANCLQ9NW38 375 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 UTYO14607 1347 aa12.52□□□□□ -0.41
NPC1L1-201ENST00000289547 MON2Q7Z3U7 1717 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 DDR1Q08345 913 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 PNOCQ13519 176 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 SLFNL1Q499Z3 407 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 GTF3C2Q8WUA4 911 aaPredicted RBP12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 TCHPQ9BT92 498 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 PUS7LQ9H0K6 701 aaKnown RBP12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 TPX2Q9ULW0 747 aaKnown RBP12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 STX10O60499 249 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 CUTAO60888 179 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 GPC2Q8N158 579 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 GBP5Q96PP8 586 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 KCNG1Q9UIX4 513 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 RABGAP1Q9Y3P9 1069 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 PPP2R3BQ9Y5P8 575 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 GOLGA8FQ08AF8 430 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 GOLGA8DPQ0D2H9 430 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 SNAPC2Q13487 334 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 GPIHBP1Q8IV16 184 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 NCAPGQ9BPX3 1015 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 NOC4LQ9BVI4 516 aaKnown RBP12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 BCL9LQ86UU0 1499 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 PRKAB2O43741 272 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 FDX1P10109 184 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 ATG9AQ7Z3C6 839 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 FBXO33Q7Z6M2 555 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 RNF168Q8IYW5 571 aaPredicted RBP12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 FANCBQ8NB91 859 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 DCAF4Q8WV16 495 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 ZNF512BQ96KM6 892 aaPredicted RBP12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 NOX5Q96PH1 765 aa12.51□□□□□ -0.41
NPC1L1-201ENST00000289547 CETN3O15182 167 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 CFAP221Q4G0U5 840 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 SYDE2Q5VT97 1194 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 FAM151AQ8WW52 585 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 ST7Q9NRC1 585 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 RFX7Q2KHR2 1363 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 TESPA1A2RU30 521 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 VWA3AA6NCI4 1184 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 SMIM24O75264 130 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 POSTNQ15063 836 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 OSBP2Q969R2 916 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 PLIN2Q99541 437 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 ZFYVE28Q9HCC9 887 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 DAGLAQ9Y4D2 1042 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 TRIM66O15016 1216 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 CCNT1O60563 726 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 FAM47CQ5HY64 1035 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 ZNF274Q96GC6 653 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 MYL10Q9BUA6 226 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 TPCN1Q9ULQ1 816 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 PIK3C2AO00443 1686 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 KIF3CO14782 793 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 ZMYND10O75800 440 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 CASP8Q14790 479 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 SLC35F6Q8N357 371 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 GLG1Q92896 1179 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 STRBPQ96SI9 672 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 RRAGCQ9HB90 399 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 PCDHA1Q9Y5I3 950 aa12.5□□□□□ -0.41
NPC1L1-201ENST00000289547 LRRD1A4D1F6 860 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 TMEM110-MUSTN1A8MSY1 372 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 CEP104O60308 925 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 257.9 ms