RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 TMEM240Q5SV17 173 aa11.12□□□□□ -0.63
HMHB1-201ENST00000289448 CCDC62Q6P9F0 684 aa11.12□□□□□ -0.63
HMHB1-201ENST00000289448 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
HMHB1-201ENST00000289448 SCFD2Q8WU76 684 aa11.12□□□□□ -0.63
HMHB1-201ENST00000289448 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
HMHB1-201ENST00000289448 RNPC3Q96LT9 517 aaKnown RBP11.12□□□□□ -0.63
HMHB1-201ENST00000289448 TTYH1Q9H313 450 aaPredicted RBP11.12□□□□□ -0.63
HMHB1-201ENST00000289448 GPHNQ9NQX3 736 aaPredicted RBP11.12□□□□□ -0.63
HMHB1-201ENST00000289448 RBM8AQ9Y5S9 174 aaKnown RBP11.12□□□□□ -0.63
HMHB1-201ENST00000289448 TTC28Q96AY4 2481 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 TLR3O15455 904 aaKnown RBP11.11□□□□□ -0.63
HMHB1-201ENST00000289448 CYTH3O43739 400 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 MYL3P08590 195 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 ACRP10323 421 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 TXNP10599 105 aaKnown RBP11.11□□□□□ -0.63
HMHB1-201ENST00000289448 TROAPQ12815 778 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 GRM4Q14833 912 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 PPP2R5BQ15173 497 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 ERICH6BQ5W0A0 696 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 MCF2L2Q86YR7 1114 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 MB21D2Q8IYB1 491 aaPredicted RBP11.11□□□□□ -0.63
HMHB1-201ENST00000289448 IGDCC4Q8TDY8 1250 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 NSUN6Q8TEA1 469 aaKnown RBP11.11□□□□□ -0.63
HMHB1-201ENST00000289448 VWCEQ96DN2 955 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 RMDN3Q96TC7 470 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 LSG1Q9H089 658 aaKnown RBP11.11□□□□□ -0.63
HMHB1-201ENST00000289448 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
HMHB1-201ENST00000289448 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
HMHB1-201ENST00000289448 TRMT13Q9NUP7 481 aaKnown RBP11.11□□□□□ -0.63
HMHB1-201ENST00000289448 MRPL11Q9Y3B7 192 aaKnown RBP11.11□□□□□ -0.63
HMHB1-201ENST00000289448 A6NJR5 290 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 ZBTB5O15062 677 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 NKRFO15226 690 aaKnown RBP eCLIP11.1□□□□□ -0.63
HMHB1-201ENST00000289448 CFBP00751 764 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 EIF2AK2P19525 551 aaKnown RBP11.1□□□□□ -0.63
HMHB1-201ENST00000289448 CPT1AP50416 773 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 HSD17B4P51659 736 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 CCL23P55773 120 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 GHRHRQ02643 423 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 PPIGQ13427 754 aaKnown RBP eCLIP11.1□□□□□ -0.63
HMHB1-201ENST00000289448 WTAPQ15007 396 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 LY6KQ17RY6 165 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 NBPF20Q3BBV1 942 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 RASIP1Q5U651 963 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 ZNF365Q70YC5 407 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 TMEM199Q8N511 208 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 SLC17A8Q8NDX2 589 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 PIGSQ96S52 555 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 NOC4LQ9BVI4 516 aaKnown RBP11.1□□□□□ -0.63
HMHB1-201ENST00000289448 AMNQ9BXJ7 453 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 MAF1Q9H063 256 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 WNT8AQ9H1J5 351 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 HIPK3Q9H422 1215 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 RIOX1Q9H6W3 641 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 PCDHA1Q9Y5I3 950 aa11.1□□□□□ -0.63
HMHB1-201ENST00000289448 GRXCR1A8MXD5 290 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 RGS20O76081 388 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 NR3C2P08235 984 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 CYP2C9P11712 490 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 HOXA13P31271 388 aaPredicted RBP11.09□□□□□ -0.63
HMHB1-201ENST00000289448 ARHGAP1Q07960 439 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 TTLL4Q14679 1199 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 STXBP2Q15833 593 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 TMEM67Q5HYA8 995 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 ARHGEF16Q5VV41 709 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 SEPT14Q6ZU15 432 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 RALYLQ86SE5 291 aaKnown RBP11.09□□□□□ -0.63
HMHB1-201ENST00000289448 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 AFG1LQ8WV93 481 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 IWS1Q96ST2 819 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 MPHOSPH6Q99547 160 aaKnown RBP11.09□□□□□ -0.63
HMHB1-201ENST00000289448 CDX2Q99626 313 aaPredicted RBP11.09□□□□□ -0.63
HMHB1-201ENST00000289448 ESYT1Q9BSJ8 1104 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 MTG1Q9BT17 334 aaPredicted RBP11.09□□□□□ -0.63
HMHB1-201ENST00000289448 MYL10Q9BUA6 226 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 SEZ6LQ9BYH1 1024 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 IL23AQ9NPF7 189 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 PXMP2Q9NR77 195 aa11.09□□□□□ -0.63
HMHB1-201ENST00000289448 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
HMHB1-201ENST00000289448 SPTBN5Q9NRC6 3674 aaKnown RBP11.09□□□□□ -0.63
HMHB1-201ENST00000289448 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.08□□□□□ -0.64
HMHB1-201ENST00000289448 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.08□□□□□ -0.64
HMHB1-201ENST00000289448 ERICH2A1L162 156 aa11.08□□□□□ -0.64
HMHB1-201ENST00000289448 B4DLN1 442 aa11.08□□□□□ -0.64
HMHB1-201ENST00000289448 MRPL12P52815 198 aaKnown RBP11.08□□□□□ -0.64
HMHB1-201ENST00000289448 IL31RAQ8NI17 732 aa11.08□□□□□ -0.64
HMHB1-201ENST00000289448 PIBF1Q8WXW3 757 aa11.08□□□□□ -0.64
HMHB1-201ENST00000289448 SCLYQ96I15 445 aa11.08□□□□□ -0.64
HMHB1-201ENST00000289448 PDCD2LQ9BRP1 358 aa11.08□□□□□ -0.64
HMHB1-201ENST00000289448 SCN10AQ9Y5Y9 1956 aa11.08□□□□□ -0.64
HMHB1-201ENST00000289448 MYO9BQ13459 2157 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 PNMA6FA0A0J9YX94 578 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 RBAK-RBAKDNI3L0D1 243 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 SLC27A2O14975 620 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 PRC1O43663 620 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 EIF3JO75822 258 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms