RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 IFNAR2P48551 515 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 H2AFVQ71UI9 128 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 PCGF5Q86SE9 256 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 KSR1Q8IVT5 923 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 SNX19Q92543 992 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 ASPSCR1Q9BZE9 553 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 STK17AQ9UEE5 414 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 PGRMC1O00264 195 aaKnown RBP9.45□□□□□ -0.9
NIPBL-201ENST00000282516 MAFGO15525 162 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 CTNND1O60716 968 aaKnown RBP9.45□□□□□ -0.9
NIPBL-201ENST00000282516 CFBP00751 764 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 SLC4A1P02730 911 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 TRIML2Q8N7C3 387 aa9.45□□□□□ -0.9
NIPBL-201ENST00000282516 NCOA5Q9HCD5 579 aaKnown RBP9.45□□□□□ -0.9
NIPBL-201ENST00000282516 DCTN3O75935 186 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 TMEM259Q4ZIN3 620 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 CDC37L1Q7L3B6 337 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 TBC1D22AQ8WUA7 517 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 SNX25Q9H3E2 840 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 PCDHB4Q9Y5E5 795 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 POLGP54098 1239 aaPredicted RBP9.44□□□□□ -0.9
NIPBL-201ENST00000282516 KRT40Q6A162 431 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 GALNT17Q6IS24 598 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 SESTD1Q86VW0 696 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 PPM1KQ8N3J5 372 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 CDC26Q8NHZ8 85 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 BLZF1Q9H2G9 400 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 ATP8A2Q9NTI2 1148 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 CPSF3Q9UKF6 684 aaKnown RBP9.44□□□□□ -0.9
NIPBL-201ENST00000282516 INTUQ9ULD6 942 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 MFAP3P55082 362 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 CCDC184Q52MB2 194 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 LRRC8BQ6P9F7 803 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 PATL1Q86TB9 770 aaKnown RBP9.44□□□□□ -0.9
NIPBL-201ENST00000282516 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
NIPBL-201ENST00000282516 PANK4Q9NVE7 773 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 TRIM33Q9UPN9 1127 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 L3MBTL1Q9Y468 752 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 SNX5Q9Y5X3 404 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 GNPATO15228 680 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 EHHADHQ08426 723 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 DDB1Q16531 1140 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 SGO2Q562F6 1265 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 NEK8Q86SG6 692 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 ACSBG1Q96GR2 724 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 DCTPP1Q9H773 170 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 ATP6V0A4Q9HBG4 840 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 PARP10Q53GL7 1025 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 FRA10AC1Q70Z53 315 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 DEPDC1BQ8WUY9 529 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 BCL2L12Q9HB09 334 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 TMEM232C9JQI7 657 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 RAPGEF3O95398 923 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 HSPD1P10809 573 aaKnown RBP9.44□□□□□ -0.9
NIPBL-201ENST00000282516 ADAT2Q7Z6V5 191 aaKnown RBP9.44□□□□□ -0.9
NIPBL-201ENST00000282516 SUPT20HQ8NEM7 779 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 CHURC1Q8WUH1 139 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 CFAP36Q96G28 342 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 MYH10P35580 1976 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 DNMBPQ6XZF7 1577 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 CCDC78A2IDD5 438 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 CCDC151A5D8V7 595 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 MED7O43513 233 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 BUB1O43683 1085 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 ATP5HO75947 161 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 SRGAP2CP0DJJ0 459 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 SZRD1Q7Z422 152 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 GPIHBP1Q8IV16 184 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 APPBP2Q92624 585 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 VPS39Q96JC1 886 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 PPP1R12AO14974 1030 aaPredicted RBP9.44□□□□□ -0.9
NIPBL-201ENST00000282516 SLFN14P0C7P3 912 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 NR1H3Q13133 447 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 KIF19Q2TAC6 998 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 OLFM3Q96PB7 478 aa9.44□□□□□ -0.9
NIPBL-201ENST00000282516 MYO1FO00160 1098 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 KRT33BQ14525 404 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 FSCBQ5H9T9 825 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 PLEKHM3Q6ZWE6 761 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 SBNO1A3KN83 1393 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 WBP4O75554 376 aaKnown RBP9.43□□□□□ -0.9
NIPBL-201ENST00000282516 PAMP19021 973 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 ARL4AP40617 200 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 PTK2Q05397 1052 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 FAM47CQ5HY64 1035 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 KRT39Q6A163 491 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 ENAHQ8N8S7 591 aaPredicted RBP9.43□□□□□ -0.9
NIPBL-201ENST00000282516 ARMT1Q9H993 441 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 ANXA13P27216 316 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 TRAPPC3LQ5T215 181 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 METTL23Q86XA0 190 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 DDX42Q86XP3 938 aaKnown RBP eCLIP9.43□□□□□ -0.9
NIPBL-201ENST00000282516 CRLF3Q8IUI8 442 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 CPXCR1Q8N123 301 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 NOP53Q9NZM5 478 aaKnown RBP9.43□□□□□ -0.9
NIPBL-201ENST00000282516 MROH5Q6ZUA9 1318 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 H7C1D1 291 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 TADA3O75528 432 aa9.43□□□□□ -0.9
NIPBL-201ENST00000282516 NCF2P19878 526 aaPredicted RBP9.43□□□□□ -0.9
NIPBL-201ENST00000282516 TRPC1P48995 793 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms