RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 TEX35Q5T0J7 233 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 PRAMEF18Q5VWM3 479 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 ANKRD40Q6AI12 368 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 CC2D2BQ6DHV5 1058 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 ADSSL1Q8N142 457 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 DAGLBQ8NCG7 672 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 DDX12PQ92771 950 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 CCDC17Q96LX7 622 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 PYM1Q9BRP8 204 aaKnown RBP6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 NOC4LQ9BVI4 516 aaKnown RBP6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 ANO3Q9BYT9 981 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 BMP2KQ9NSY1 1161 aaPredicted RBP6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 FZD1Q9UP38 647 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 SUGT1Q9Y2Z0 365 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 POTEFA5A3E0 1075 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 ABL1P00519 1130 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 POTEIP0CG38 1075 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 CASQ1P31415 396 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 AMPD3Q01432 767 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 PABPC4Q13310 644 aaKnown RBP eCLIP6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 CDKAL1Q5VV42 579 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 POTEGQ6S5H5 508 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 POTEEQ6S8J3 1075 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 FBXO11Q86XK2 927 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 CNOT6LQ96LI5 555 aaKnown RBP6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 CHP1Q99653 195 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 CRACR2AQ9BSW2 395 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 GLIS2Q9BZE0 524 aaPredicted RBP6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 CCSER1Q9C0I3 900 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 DHX36Q9H2U1 1008 aaKnown RBP6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 MMRN2Q9H8L6 949 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 KBTBD4Q9NVX7 518 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 PUF60Q9UHX1 559 aaKnown RBP6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 GUCA1BQ9UMX6 200 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 GJA3Q9Y6H8 435 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 COL24A1Q17RW2 1714 aa6.76□□□□□ -1.33
TNFSF4-201ENST00000281834 SFI1A8K8P3 1242 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 KLRC4O43908 158 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 SLU7O95391 586 aaKnown RBP6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 CCDC175P0C221 793 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 BMP3P12645 472 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 ARID5AQ03989 594 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 PRKG1Q13976 671 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 SYCP1Q15431 976 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 NBPF9Q3BBW0 867 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 ZNF569Q5MCW4 686 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 MAEAQ7L5Y9 396 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 APTXQ7Z2E3 356 aaKnown RBP6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 REXO1L1PQ8IX06 675 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 CCDC155Q8N6L0 562 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 TUBGCP2Q9BSJ2 902 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 RIC8AQ9NPQ8 531 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 UBR3Q6ZT12 1888 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 SBF2Q86WG5 1849 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 TTC26A0AVF1 554 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 PSDA5PKW4 1024 aaPredicted RBP6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 FANCGO15287 622 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 STX10O60499 249 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 MFAP3LO75121 409 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 DNA2P51530 1060 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 TBC1D10BQ4KMP7 808 aaPredicted RBP6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 HERC4Q5GLZ8 1057 aaPredicted RBP6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 TMEM179Q6ZVK1 233 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 SIAH1Q8IUQ4 282 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 TMEM139Q8IV31 216 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 PNMA5Q96PV4 448 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 AMNQ9BXJ7 453 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 BLOC1S4Q9NUP1 217 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 TRIM10Q9UDY6 481 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 CASZ1Q86V15 1759 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 TRAF5O00463 557 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 LAD1O00515 517 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 SPAG1Q07617 926 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 KIF4BQ2VIQ3 1234 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 SYDE2Q5VT97 1194 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 GPBP1Q86WP2 473 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 IRF2BP1Q8IU81 584 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 ELOA2Q8IYF1 753 aaPredicted RBP6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 KIAA0895Q8NCT3 520 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 HAS1Q92839 578 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 P2RX5Q93086 422 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 AK8Q96MA6 479 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 DRC1Q96MC2 740 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 P2RX7Q99572 595 aaKnown RBP6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 SH2D3AQ9BRG2 576 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 AGPAT5Q9NUQ2 364 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 ZBTB21Q9ULJ3 1066 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 BCS1LQ9Y276 419 aa6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 LUC7L2Q9Y383 392 aaKnown RBP6.75□□□□□ -1.33
TNFSF4-201ENST00000281834 LY75O60449 1722 aa6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 KIAA1551Q9HCM1 1747 aa6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 IGKV6D-41A0A0C4DH26 115 aa6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 H7C1D1 291 aa6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 EDIL3O43854 480 aa6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 SNHG28P0DPA3 235 aa6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 PRPHP41219 470 aa6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 ARHGAP4P98171 946 aa6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 CYP27A1Q02318 531 aa6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 TBX2Q13207 712 aaPredicted RBP6.74□□□□□ -1.33
TNFSF4-201ENST00000281834 PLS1Q14651 629 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms