RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 CCDC88AQ3V6T2 1871 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 VSTM5A8MXK1 200 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 TK2O00142 265 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 ERC2O15083 957 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 BRINP1O60477 761 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SEC24BO95487 1268 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 GNAI2P04899 355 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 APPP05067 770 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 FGFR1P11362 822 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 IMPDH2P12268 514 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 TXLNAP40222 546 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 ESCO1Q5FWF5 840 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 XRRA1Q6P2D8 792 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 PKN3Q6P5Z2 889 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 C6orf15Q6UXA7 325 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 DDX46Q7L014 1031 aaKnown RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 MCM10Q7L590 875 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SUGP1Q8IWZ8 645 aaKnown RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 CLASRPQ8N2M8 674 aaKnown RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 CNTD1Q8N815 330 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 ZNF784Q8NCA9 323 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 SGCZQ96LD1 299 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 PPM1MQ96MI6 270 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 NAP1L4Q99733 375 aaKnown RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 SPATA31A1Q5TZJ5 1347 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SERTM1A2A2V5 107 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 BECN2A8MW95 431 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 ARHGAP33O14559 1287 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 TM4SF5O14894 197 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 TLR5O60602 858 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 CT47B1P0C2W7 299 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 ZSCAN20P17040 1043 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 GBP2P32456 591 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 KCNQ4P56696 695 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SKOR1P84550 965 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 C3orf67Q6ZVT6 689 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 PDZD3Q86UT5 571 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SLC41A1Q8IVJ1 513 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 PPM1KQ8N3J5 372 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 ENAHQ8N8S7 591 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 GIMAP8Q8ND71 665 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 RAPGEF4Q8WZA2 1011 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SKA1Q96BD8 255 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 TBC1D20Q96BZ9 403 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SYTL4Q96C24 671 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 TAAR9Q96RI9 348 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 KIF3AQ9Y496 699 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 F5H0A9 414 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 GOLGA6L19H0YKK7 550 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 PRKD3O94806 890 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 ADD2P35612 726 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 IL6STP40189 918 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 ZNF143P52747 638 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 TPM4P67936 248 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SYDE1Q6ZW31 735 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 KRT78Q8N1N4 520 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 TMEM102Q8N9M5 508 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 SLC7A14Q8TBB6 771 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 GPR152Q8TDT2 470 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 OSBP2Q969R2 916 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 C1orf159Q96HA4 380 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SEZ6LQ9BYH1 1024 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 GRIP2Q9C0E4 1043 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 WDR12Q9GZL7 423 aaKnown RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 SMOC1Q9H4F8 434 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 FAM13BQ9NYF5 915 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 TRPC5Q9UL62 973 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 MAP3K19Q56UN5 1328 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 SOWAHBA6NEL2 793 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 SLC26A4O43511 780 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 NCAM1P13591 858 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 CLK1P49759 484 aaKnown RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 SSRP1Q08945 709 aaKnown RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 LAMC2Q13753 1193 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 RABEP1Q15276 862 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 DGKKQ5KSL6 1271 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 CDCP2Q5VXM1 449 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 RASSF3Q86WH2 238 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 NME9Q86XW9 330 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 SIAH1Q8IUQ4 282 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 PHACTR1Q9C0D0 580 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 PPCSQ9HAB8 311 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 DAAM1Q9Y4D1 1078 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 MYH14Q7Z406 1995 aaKnown RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 FRS3O43559 492 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 DNAJA2O60884 412 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 MYCP01106 439 aaPredicted RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 RPN1P04843 607 aaKnown RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 PFKPQ01813 784 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 GRB10Q13322 594 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 SETDB1Q15047 1291 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 HSF5Q4G112 596 aaPredicted RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 RUFY4Q6ZNE9 571 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 GALNT5Q7Z7M9 940 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 TTC6Q86TZ1 520 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 UNC5CLQ8IV45 518 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 PPHLN1Q8NEY8 458 aaKnown RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 PI4K2BQ8TCG2 481 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 BICD2Q8TD16 824 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms