RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 ATP6V0A2Q9Y487 856 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 MICALL2Q8IY33 904 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 PROM2Q8N271 834 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 PRM3Q9NNZ6 103 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 GOLGB1Q14789 3259 aaKnown RBP15.85■□□□□ 0.13
TMEM47-201ENST00000275954 PSMD14O00487 310 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 CCDC172P0C7W6 258 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 SRGNP10124 158 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 CXCR5P32302 372 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 C12orf60Q5U649 245 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 SND1Q7KZF4 910 aaKnown RBP eCLIP15.85■□□□□ 0.13
TMEM47-201ENST00000275954 ATRIPQ8WXE1 791 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 ARMCX3Q9UH62 379 aaPredicted RBP15.85■□□□□ 0.13
TMEM47-201ENST00000275954 CNOT7Q9UIV1 285 aaKnown RBP15.85■□□□□ 0.13
TMEM47-201ENST00000275954 POLRMTO00411 1230 aaKnown RBP15.85■□□□□ 0.13
TMEM47-201ENST00000275954 FLOT1O75955 427 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 ABCB4P21439 1286 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 ASPRV1Q53RT3 343 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 E4F1Q66K89 784 aaPredicted RBP15.85■□□□□ 0.13
TMEM47-201ENST00000275954 ZNF579Q8NAF0 562 aaKnown RBP15.85■□□□□ 0.13
TMEM47-201ENST00000275954 NAP1L4Q99733 375 aaKnown RBP15.85■□□□□ 0.13
TMEM47-201ENST00000275954 GLT8D2Q9H1C3 349 aa15.85■□□□□ 0.13
TMEM47-201ENST00000275954 DDNO94850 711 aaPredicted RBP15.84■□□□□ 0.13
TMEM47-201ENST00000275954 ZNF512BQ96KM6 892 aaPredicted RBP15.84■□□□□ 0.13
TMEM47-201ENST00000275954 HAUS4Q9H6D7 363 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 CDC23Q9UJX2 597 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 RDXP35241 583 aaKnown RBP15.84■□□□□ 0.13
TMEM47-201ENST00000275954 CCZ1BP86790 482 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 CCZ1P86791 482 aaPredicted RBP15.84■□□□□ 0.13
TMEM47-201ENST00000275954 GPATCH4Q5T3I0 446 aaKnown RBP15.84■□□□□ 0.13
TMEM47-201ENST00000275954 RWDD2AQ9UIY3 292 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 CETN2P41208 172 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 SEPT7Q16181 437 aaKnown RBP15.84■□□□□ 0.13
TMEM47-201ENST00000275954 TCP11X2Q5H9J9 407 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 AMNQ9BXJ7 453 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 TSGA10Q9BZW7 698 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 KANSL2Q9H9L4 492 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 SP8Q8IXZ3 490 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 MTFR1LQ9H019 292 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 PCDHAC2Q9Y5I4 1007 aa15.84■□□□□ 0.13
TMEM47-201ENST00000275954 XRCC5P13010 732 aaKnown RBP15.83■□□□□ 0.12
TMEM47-201ENST00000275954 ARL6IP4Q66PJ3 421 aaKnown RBP15.83■□□□□ 0.12
TMEM47-201ENST00000275954 CCDC25Q86WR0 208 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 CLIC2O15247 247 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 TNFAIP3P21580 790 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 CCNE1P24864 410 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 CLCN6P51797 869 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 CFAP58Q5T655 872 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 GOLGA6L10A0A0M3HER8 536 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 TDP2O95551 362 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 IRX3P78415 501 aaPredicted RBP15.83■□□□□ 0.12
TMEM47-201ENST00000275954 TROAPQ12815 778 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 PODNQ7Z5L7 613 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 TMOD4Q9NZQ9 345 aa15.83■□□□□ 0.12
TMEM47-201ENST00000275954 SFI1A8K8P3 1242 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 USP17L10C9JJH3 530 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 MFAP3LO75121 409 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 AKR1B1P15121 316 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 FGFR2P21802 821 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 CTNNA2P26232 953 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 DPH6Q7L8W6 267 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 CCDC17Q96LX7 622 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 ANKRD62A6NC57 917 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 EEF1GP26641 437 aaKnown RBP15.82■□□□□ 0.12
TMEM47-201ENST00000275954 SF3A3Q12874 501 aaKnown RBP eCLIP15.82■□□□□ 0.12
TMEM47-201ENST00000275954 BIRC3Q13489 604 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 TTBK2Q6IQ55 1244 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 DHTKD1Q96HY7 919 aaPredicted RBP15.82■□□□□ 0.12
TMEM47-201ENST00000275954 AK8Q96MA6 479 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 AGXT2Q9BYV1 514 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 TMEM39BQ9GZU3 492 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 NR2F2P24468 414 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 NFIAQ12857 509 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 SEPT2Q15019 361 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 PTPAQ15257 358 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 KRT26Q7Z3Y9 468 aa15.82■□□□□ 0.12
TMEM47-201ENST00000275954 ADAT2Q7Z6V5 191 aaKnown RBP15.82■□□□□ 0.12
TMEM47-201ENST00000275954 NALCNQ8IZF0 1738 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 CALUO43852 315 aaPredicted RBP15.81■□□□□ 0.12
TMEM47-201ENST00000275954 ORC4O43929 436 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 NDUFA10O95299 355 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 EEF2P13639 858 aaKnown RBP15.81■□□□□ 0.12
TMEM47-201ENST00000275954 ATP2C1P98194 919 aaPredicted RBP15.81■□□□□ 0.12
TMEM47-201ENST00000275954 NLGN2Q8NFZ4 835 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 LMBR1Q8WVP7 490 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 WDR24Q96S15 920 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 WRNIP1Q96S55 665 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 PHF20Q9BVI0 1012 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 SH2D4AQ9H788 454 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 TESPA1A2RU30 521 aaPredicted RBP15.81■□□□□ 0.12
TMEM47-201ENST00000275954 KRT5P13647 590 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 HPDP32754 393 aaPredicted RBP15.81■□□□□ 0.12
TMEM47-201ENST00000275954 GMPSP49915 693 aaPredicted RBP15.81■□□□□ 0.12
TMEM47-201ENST00000275954 TOB1P50616 345 aaPredicted RBP15.81■□□□□ 0.12
TMEM47-201ENST00000275954 TNFAIP1Q13829 316 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 SRGAP1Q7Z6B7 1085 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 FBXO33Q7Z6M2 555 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 U2AF1L4Q8WU68 220 aaKnown RBP15.81■□□□□ 0.12
TMEM47-201ENST00000275954 BPIFA3Q9BQP9 254 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms