RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 PTPRTO14522 1441 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 EHHADHQ08426 723 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 SLC12A1Q13621 1099 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 SEPT6Q14141 434 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 CEP170P1Q96L14 293 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 RRAGDQ9NQL2 400 aaPredicted RBP12.96□□□□□ -0.33
SHPRH-201ENST00000275233 FAM114A2Q9NRY5 505 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 ANAPC5Q9UJX4 755 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 PPP2R2CQ9Y2T4 447 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 XPAP23025 273 aaPredicted RBP12.96□□□□□ -0.33
SHPRH-201ENST00000275233 STAT2P52630 851 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 SCARA5Q6ZMJ2 495 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 TBCKQ8TEA7 893 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 SHANK2Q9UPX8 1470 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 BRD1O95696 1058 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 IL1RL1Q01638 556 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 MYLK4Q86YV6 388 aaPredicted RBP12.96□□□□□ -0.33
SHPRH-201ENST00000275233 LEMD3Q9Y2U8 911 aa12.96□□□□□ -0.33
SHPRH-201ENST00000275233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.96□□□□□ -0.34
SHPRH-201ENST00000275233 USP17L3A6NCW0 530 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 USP17L4A6NCW7 530 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 MUM1L1Q5H9M0 696 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 USP17L1Q7RTZ2 530 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 ARMC9Q7Z3E5 817 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 TMEM94Q12767 1356 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 MYOM2P54296 1465 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 BAG2O95816 211 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 TROVE2P10155 538 aaKnown RBP eCLIP12.96□□□□□ -0.34
SHPRH-201ENST00000275233 YWHAGP61981 247 aaKnown RBP eCLIP12.96□□□□□ -0.34
SHPRH-201ENST00000275233 CCNA1P78396 465 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 PRPSAP1Q14558 356 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 KIAA1841Q6NSI8 718 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 PDZD4Q76G19 769 aaPredicted RBP12.96□□□□□ -0.34
SHPRH-201ENST00000275233 CCNYQ8ND76 341 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 PRKAG2Q9UGJ0 569 aa12.96□□□□□ -0.34
SHPRH-201ENST00000275233 FEZ2Q9UHY8 353 aaPredicted RBP12.96□□□□□ -0.34
SHPRH-201ENST00000275233 H0YCG3 227 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 ENC1O14682 589 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 BNIP3LO60238 219 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 NR2F2P24468 414 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 LONP1P36776 959 aaKnown RBP12.95□□□□□ -0.34
SHPRH-201ENST00000275233 ZNF445P59923 1031 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 PTK2Q05397 1052 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 RETREG2Q8NC44 543 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 IRAK4Q9NWZ3 460 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 CD58P19256 250 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 CMA1P23946 247 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 METTL23Q86XA0 190 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 FIS1Q9Y3D6 152 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 SEMA3EO15041 775 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 ZSCAN20P17040 1043 aaPredicted RBP12.95□□□□□ -0.34
SHPRH-201ENST00000275233 MFAP3P55082 362 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 ASPRV1Q53RT3 343 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 MCTP2Q6DN12 878 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 LMNTD2Q8IXW0 634 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 CACNB3P54284 484 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 TTC30AQ86WT1 665 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 TTC30BQ8N4P2 665 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 SLC7A3Q8WY07 619 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 LARP4BQ92615 738 aaKnown RBP12.95□□□□□ -0.34
SHPRH-201ENST00000275233 SLC38A10Q9HBR0 1119 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 COPB1P53618 953 aaKnown RBP12.95□□□□□ -0.34
SHPRH-201ENST00000275233 FOXD4Q12950 439 aaPredicted RBP12.95□□□□□ -0.34
SHPRH-201ENST00000275233 RASSF4Q9H2L5 321 aa12.95□□□□□ -0.34
SHPRH-201ENST00000275233 DDIT3P35638 169 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 SYDE2Q5VT97 1194 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 JADE1Q6IE81 842 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 GALNT17Q6IS24 598 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 ARHGAP24Q8N264 748 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.94□□□□□ -0.34
SHPRH-201ENST00000275233 PUS7LQ9H0K6 701 aaKnown RBP12.94□□□□□ -0.34
SHPRH-201ENST00000275233 CLGNO14967 610 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 POLR2BP30876 1174 aaKnown RBP12.94□□□□□ -0.34
SHPRH-201ENST00000275233 NT5C1BQ96P26 610 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 VCXQ9H320 206 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 UBN1Q9NPG3 1134 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 BMP3P12645 472 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 SUPT20HL1Q3ZLR7 823 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 FTOQ9C0B1 505 aaKnown RBP eCLIP12.94□□□□□ -0.34
SHPRH-201ENST00000275233 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.94□□□□□ -0.34
SHPRH-201ENST00000275233 BAIAP2L1Q9UHR4 511 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 FMNL1O95466 1100 aaPredicted RBP12.94□□□□□ -0.34
SHPRH-201ENST00000275233 GBP7Q8N8V2 638 aaPredicted RBP12.94□□□□□ -0.34
SHPRH-201ENST00000275233 LSG1Q9H089 658 aaKnown RBP12.94□□□□□ -0.34
SHPRH-201ENST00000275233 ZFYVE16Q7Z3T8 1539 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 RNF40O75150 1001 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 SESN3P58005 492 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 GNGT1P63211 74 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 UBE3CQ15386 1083 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 TUBGCP2Q9BSJ2 902 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 PBRM1Q86U86 1689 aa12.94□□□□□ -0.34
SHPRH-201ENST00000275233 GOLGA8IPA6NC78 632 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 GOLGA8JA6NMD2 632 aa12.93□□□□□ -0.34
SHPRH-201ENST00000275233 C21orf2O43822 256 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms