RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 AZIN2Q96A70 460 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 USP44Q9H0E7 712 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 SWAP70Q9UH65 585 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 CRYBG1Q9Y4K1 1723 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 GOLGA6L10A0A0M3HER8 536 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 GCOM1H8Y6P7 765 aaPredicted RBP10.13□□□□□ -0.79
PDGFC-201ENST00000274071 HNRNPRO43390 633 aaKnown RBP10.13□□□□□ -0.79
PDGFC-201ENST00000274071 ALDH1L1O75891 902 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 MYZAPP0CAP1 466 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 PHEXP78562 749 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 MCL1Q07820 350 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 KIF5AQ12840 1032 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 ITIH4Q14624 930 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 PKN1Q16512 942 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 RUFY4Q6ZNE9 571 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 SEPT14Q6ZU15 432 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 KCNH5Q8NCM2 988 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 VCX3BQ9H321 246 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 VCX3AQ9NNX9 186 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 CWC25Q9NXE8 425 aaPredicted RBP10.13□□□□□ -0.79
PDGFC-201ENST00000274071 UTP6Q9NYH9 597 aaKnown RBP10.13□□□□□ -0.79
PDGFC-201ENST00000274071 TSPYL4Q9UJ04 414 aa10.13□□□□□ -0.79
PDGFC-201ENST00000274071 AFF2P51816 1311 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 ZSCAN5CA6NGD5 496 aaPredicted RBP10.12□□□□□ -0.79
PDGFC-201ENST00000274071 GNAT3A8MTJ3 354 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 KRT9P35527 623 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 PEX5P50542 639 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 ZC3H6P61129 1189 aaKnown RBP10.12□□□□□ -0.79
PDGFC-201ENST00000274071 KRT32Q14532 448 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 SLC39A14Q15043 492 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 LMOD2Q6P5Q4 547 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 C16orf87Q6PH81 154 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 PIGWQ7Z7B1 504 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 CCNJLQ8IV13 435 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 IFT20Q8IY31 132 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 PTPRN2Q92932 1015 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 FAM136AQ96C01 138 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 NUP88Q99567 741 aaPredicted RBP10.12□□□□□ -0.79
PDGFC-201ENST00000274071 LACRTQ9GZZ8 138 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 ARHGEF3Q9NR81 526 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 ABCF3Q9NUQ8 709 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 SMARCAL1Q9NZC9 954 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 SNX12Q9UMY4 172 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 DUSP10Q9Y6W6 482 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 WDR17Q8IZU2 1322 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 LTN1O94822 1766 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 hCG_2014768A0A024R1R8 64 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 RCCD1A6NED2 376 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 SUPT3HO75486 399 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 UBOX5O94941 541 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 BAG3O95817 575 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 GNA14O95837 355 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 GSTA2P09210 222 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 P3H1Q32P28 736 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 ZNF589Q86UQ0 364 aaPredicted RBP10.12□□□□□ -0.79
PDGFC-201ENST00000274071 OR2W6PQ8NHA6 318 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 KLHDC4Q8TBB5 520 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 LZICQ8WZA0 190 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 TEKT1Q969V4 418 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 KLHL29Q96CT2 875 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 ECT2Q9H8V3 914 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 GDF3Q9NR23 364 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 ECHDC1Q9NTX5 307 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 ABCF2Q9UG63 623 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 CARMIL3Q8ND23 1372 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 MYH8P13535 1937 aa10.12□□□□□ -0.79
PDGFC-201ENST00000274071 MYL6BP14649 208 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 OXCT1P55809 520 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 LACTBP83111 547 aaPredicted RBP10.11□□□□□ -0.79
PDGFC-201ENST00000274071 POSTNQ15063 836 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 MEX3CQ5U5Q3 659 aaKnown RBP10.11□□□□□ -0.79
PDGFC-201ENST00000274071 C8orf74Q6P047 294 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 WHAMMQ8TF30 809 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 ZNF317Q96PQ6 595 aaPredicted RBP10.11□□□□□ -0.79
PDGFC-201ENST00000274071 EPB41L5Q9HCM4 733 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 ATP8A2Q9NTI2 1148 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 SCOCQ9UIL1 159 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 ITIH6Q6UXX5 1313 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 FAM237AA0A1B0GTK4 181 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 DCDC2CA8MYV0 355 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.11□□□□□ -0.79
PDGFC-201ENST00000274071 KRT86O43790 486 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 SPATA31D3P0C874 917 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 ACADSP16219 412 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 CA8P35219 290 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 GUCY2DQ02846 1103 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 MORC3Q14149 939 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 BEND3Q5T5X7 828 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 TCERG1LQ5VWI1 586 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 SPATA31D4Q6ZUB0 917 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 SLC17A8Q8NDX2 589 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 NCSTNQ92542 709 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 UBA5Q9GZZ9 404 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 HELLSQ9NRZ9 838 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 EHD2Q9NZN4 543 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 DACH1Q9UI36 760 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 GGT7Q9UJ14 662 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 NWD1Q149M9 1564 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 H0YGN5 161 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms