RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 PTPRGP23470 1445 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 NUP62P37198 522 aaPredicted RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 CHMP1BQ7LBR1 199 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 PCGF5Q86SE9 256 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 TRIM69Q86WT6 500 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 TEX28O15482 410 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 SPAG7O75391 227 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 ESRRAP11474 423 aaPredicted RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 MLH1P40692 756 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 AARSP49588 968 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBR3-201ENST00000272793 DRP2Q13474 957 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 CREB3L3Q68CJ9 461 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 ST13P5Q8NFI4 369 aaPredicted RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 U2AF1L4Q8WU68 220 aaKnown RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 TRIM45Q9H8W5 580 aaPredicted RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 ACTR5Q9H9F9 607 aaPredicted RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 PDE6BP35913 854 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 RNASELQ05823 741 aaKnown RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 NCAPG2Q86XI2 1143 aa17.07■□□□□ 0.32
UBR3-201ENST00000272793 LSM14BQ9BX40 385 aaKnown RBP17.07■□□□□ 0.32
UBR3-201ENST00000272793 UQCRFS1P1P0C7P4 283 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 HSPA6P17066 643 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 TMED2Q15363 201 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 ICA1LQ8NDH6 482 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 OTUB1Q96FW1 271 aaPredicted RBP17.06■□□□□ 0.32
UBR3-201ENST00000272793 S100A5P33763 92 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 BBS5Q8N3I7 341 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 CENPTQ96BT3 561 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 ZNF212Q9UDV6 495 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 PLD3Q8IV08 490 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 NUDCD1Q96RS6 583 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 RPAP3Q9H6T3 665 aaPredicted RBP17.06■□□□□ 0.32
UBR3-201ENST00000272793 ASAP2O43150 1006 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 STAT1P42224 750 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 RTEL1Q9NZ71 1219 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 RIMBP2O15034 1052 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 CAPZA2P47755 286 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 RWDD2BP57060 319 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 RGS9BPQ6ZS82 235 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 MTBPQ96DY7 904 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 TXKP42681 527 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 TBC1D10BQ4KMP7 808 aaPredicted RBP17.06■□□□□ 0.32
UBR3-201ENST00000272793 ZBTB18Q99592 522 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 CNGB3Q9NQW8 809 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 PAG1Q9NWQ8 432 aa17.06■□□□□ 0.32
UBR3-201ENST00000272793 ITGAXP20702 1163 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 GUCY2CP25092 1073 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 DYMQ7RTS9 669 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 DESI2Q9BSY9 194 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 FAM207AQ9NSI2 230 aaPredicted RBP17.05■□□□□ 0.32
UBR3-201ENST00000272793 MTRF1O75570 445 aaKnown RBP17.05■□□□□ 0.32
UBR3-201ENST00000272793 APOA4P06727 396 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 HOMEZQ8IX15 550 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
UBR3-201ENST00000272793 ARHGEF10LQ9HCE6 1279 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 NLRC4Q9NPP4 1024 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 HPS4Q9NQG7 708 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 SLC8A2Q9UPR5 921 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
UBR3-201ENST00000272793 CCDC78A2IDD5 438 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 PIK3CAP42336 1068 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 PDE11AQ9HCR9 933 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 F8W8V4 182 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 COPB1P53618 953 aaKnown RBP17.05■□□□□ 0.32
UBR3-201ENST00000272793 TRMT44Q8IYL2 757 aaKnown RBP17.05■□□□□ 0.32
UBR3-201ENST00000272793 YIPF3Q9GZM5 350 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 PYGBP11216 843 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 ACTN1P12814 892 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 CYP2J2P51589 502 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 HERC4Q5GLZ8 1057 aaPredicted RBP17.05■□□□□ 0.32
UBR3-201ENST00000272793 CCNYQ8ND76 341 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 AGBL1Q96MI9 1066 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 PDE6CP51160 858 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 EIF6P56537 245 aaKnown RBP17.05■□□□□ 0.32
UBR3-201ENST00000272793 BRAPQ7Z569 592 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 NELFBQ8WX92 580 aa17.05■□□□□ 0.32
UBR3-201ENST00000272793 NPHP3Q7Z494 1330 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 BNIP3LO60238 219 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 TMOD1P28289 359 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 HADHAP40939 763 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 TMED10P49755 219 aaKnown RBP17.04■□□□□ 0.32
UBR3-201ENST00000272793 DEPDC7Q96QD5 511 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 SCG2P13521 617 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 NAA35Q5VZE5 725 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 OLFML2BQ68BL8 750 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 FAM173BQ6P4H8 233 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 RFX6Q8HWS3 928 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 STAMQ92783 540 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 SAAL1Q96ER3 474 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 YIPF2Q9BWQ6 316 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 RGL1Q9NZL6 768 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 STAG2Q8N3U4 1231 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 TDRD7Q8NHU6 1098 aaKnown RBP17.04■□□□□ 0.32
UBR3-201ENST00000272793 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
UBR3-201ENST00000272793 SORBS3O60504 671 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.04■□□□□ 0.32
UBR3-201ENST00000272793 OTUD6AQ7L8S5 288 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 IFNLR1Q8IU57 520 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms