RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
CNGA3-201ENST00000272602 GSDMAQ96QA5 445 aa11.99□□□□□ -0.49
CNGA3-201ENST00000272602 CCT8L2Q96SF2 557 aa11.99□□□□□ -0.49
CNGA3-201ENST00000272602 USP40Q9NVE5 1235 aa11.99□□□□□ -0.49
CNGA3-201ENST00000272602 BSDC1Q9NW68 430 aaPredicted RBP11.99□□□□□ -0.49
CNGA3-201ENST00000272602 TARSL2A2RTX5 802 aaKnown RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 PSMD14O00487 310 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 EPHB4P54760 987 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 NAIF1Q69YI7 327 aaPredicted RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 CPLX4Q7Z7G2 160 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 KLHL7Q8IXQ5 586 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 ZNF444Q8N0Y2 327 aaPredicted RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 SPATA4Q8NEY3 305 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 ZNF473Q8WTR7 871 aaKnown RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 ALS2CR12Q96Q35 445 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 IFIH1Q9BYX4 1025 aaKnown RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 FHDC1Q9C0D6 1143 aaPredicted RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 MMRN2Q9H8L6 949 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 NHEJ1Q9H9Q4 299 aaPredicted RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 MYH8P13535 1937 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 TOPAZ1Q8N9V7 1692 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 ZSCAN5CA6NGD5 496 aaPredicted RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 PPP1R3GB7ZBB8 358 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 GCKP35557 465 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 HERVK_113P62684 666 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 MECOMQ03112 1051 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 TTMPQ5BVD1 217 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 RC3H1Q5TC82 1133 aaKnown RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 APTXQ7Z2E3 356 aaKnown RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 CCDC13Q8IYE1 715 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 FLAD1Q8NFF5 587 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 MASTLQ96GX5 879 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 TMEM87BQ96K49 555 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 PLCD4Q9BRC7 762 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 TANGO6Q9C0B7 1094 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 FAM208AQ9UK61 1670 aaKnown RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 RCCD1A6NED2 376 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 UTYO14607 1347 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 GOLGA8HP0CJ92 632 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 KLK7P49862 253 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 CD209Q9NNX6 404 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 SLC40A1Q9NP59 571 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 FAM207AQ9NSI2 230 aaPredicted RBP11.98□□□□□ -0.49
CNGA3-201ENST00000272602 HAUS2Q9NVX0 235 aa11.98□□□□□ -0.49
CNGA3-201ENST00000272602 NMT2O60551 498 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 STAT6P42226 847 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 PTGDRQ13258 359 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 CDKAL1Q5VV42 579 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 NLRP14Q86W24 1093 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 NIM1KQ8IY84 436 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 SPICE1Q8N0Z3 855 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 TBC1D16Q8TBP0 767 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 CAMKK2Q96RR4 588 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 SPON1Q9HCB6 807 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 STIM2Q9P246 746 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
CNGA3-201ENST00000272602 XDHP47989 1333 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 CNTNAP4Q9C0A0 1308 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 EIF4E1BA6NMX2 242 aaKnown RBP11.97□□□□□ -0.49
CNGA3-201ENST00000272602 SHOX2O60902 331 aaPredicted RBP11.97□□□□□ -0.49
CNGA3-201ENST00000272602 HEXIM1O94992 359 aaKnown RBP11.97□□□□□ -0.49
CNGA3-201ENST00000272602 DEXIO95424 95 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 CALRP27797 417 aaKnown RBP11.97□□□□□ -0.49
CNGA3-201ENST00000272602 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 MS4A14Q96JA4 679 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 BRIP1Q9BX63 1249 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.97□□□□□ -0.49
CNGA3-201ENST00000272602 GRIN2DO15399 1336 aa11.97□□□□□ -0.49
CNGA3-201ENST00000272602 PPP1R37O75864 691 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 CSF1RP07333 972 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 NPR1P16066 1061 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 BTDP43251 543 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 CARSP49589 748 aaKnown RBP11.96□□□□□ -0.49
CNGA3-201ENST00000272602 SARNPP82979 210 aaKnown RBP11.96□□□□□ -0.49
CNGA3-201ENST00000272602 ARID5AQ03989 594 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 BIRC2Q13490 618 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 PPP1R7Q15435 360 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
CNGA3-201ENST00000272602 TRIM6Q9C030 488 aaPredicted RBP11.96□□□□□ -0.49
CNGA3-201ENST00000272602 TMOD2Q9NZR1 351 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 DCAF8L1A6NGE4 600 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 HGSO14964 777 aaPredicted RBP11.96□□□□□ -0.49
CNGA3-201ENST00000272602 PRCPP42785 496 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 SATB1Q01826 763 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
CNGA3-201ENST00000272602 RABL6Q3YEC7 729 aaPredicted RBP11.96□□□□□ -0.49
CNGA3-201ENST00000272602 CCDC178Q5BJE1 867 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 IFT20Q8IY31 132 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 CSGALNACT2Q8N6G5 542 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 MB21D1Q8N884 522 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 TCP11Q8WWU5 503 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 CNKSR1Q969H4 720 aa11.96□□□□□ -0.49
CNGA3-201ENST00000272602 XIRP1Q702N8 1843 aaKnown RBP11.96□□□□□ -0.5
CNGA3-201ENST00000272602 FAM170AA1A519 330 aa11.96□□□□□ -0.5
CNGA3-201ENST00000272602 PLSCR1O15162 318 aa11.96□□□□□ -0.5
CNGA3-201ENST00000272602 GDF11O95390 407 aa11.96□□□□□ -0.5
CNGA3-201ENST00000272602 FMNL1O95466 1100 aaPredicted RBP11.96□□□□□ -0.5
CNGA3-201ENST00000272602 PLEKP08567 350 aaPredicted RBP11.96□□□□□ -0.5
CNGA3-201ENST00000272602 CLTAP09496 248 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms