RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 LRRC1Q9BTT6 524 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 RSPH14Q9UHP6 348 aa24.65■■□□□ 1.54
CDR2-201ENST00000268383 LAD1O00515 517 aa24.64■■□□□ 1.54
CDR2-201ENST00000268383 GNPATO15228 680 aa24.64■■□□□ 1.54
CDR2-201ENST00000268383 RRAGAQ7L523 313 aa24.64■■□□□ 1.54
CDR2-201ENST00000268383 SRLQ86TD4 932 aa24.64■■□□□ 1.54
CDR2-201ENST00000268383 SMARCC1Q92922 1105 aaPredicted RBP24.64■■□□□ 1.54
CDR2-201ENST00000268383 CCDC47Q96A33 483 aaKnown RBP24.64■■□□□ 1.54
CDR2-201ENST00000268383 CEP95Q96GE4 821 aa24.64■■□□□ 1.54
CDR2-201ENST00000268383 PURBQ96QR8 312 aaKnown RBP24.64■■□□□ 1.54
CDR2-201ENST00000268383 ERGIC2Q96RQ1 377 aa24.64■■□□□ 1.54
CDR2-201ENST00000268383 CDCA7Q9BWT1 371 aaPredicted RBP24.64■■□□□ 1.54
CDR2-201ENST00000268383 RABEP2Q9H5N1 569 aa24.64■■□□□ 1.54
CDR2-201ENST00000268383 KANSL2Q9H9L4 492 aa24.64■■□□□ 1.54
CDR2-201ENST00000268383 CWC15Q9P013 229 aaKnown RBP24.64■■□□□ 1.54
CDR2-201ENST00000268383 PCDHA13Q9Y5I0 950 aa24.64■■□□□ 1.54
CDR2-201ENST00000268383 DNA2P51530 1060 aa24.64■■□□□ 1.53
CDR2-201ENST00000268383 KIF11P52732 1056 aa24.64■■□□□ 1.53
CDR2-201ENST00000268383 CCNI2Q6ZMN8 369 aaPredicted RBP24.64■■□□□ 1.53
CDR2-201ENST00000268383 KRT25Q7Z3Z0 450 aa24.64■■□□□ 1.53
CDR2-201ENST00000268383 TMC4Q7Z404 712 aa24.64■■□□□ 1.53
CDR2-201ENST00000268383 KCNK18Q7Z418 384 aa24.64■■□□□ 1.53
CDR2-201ENST00000268383 ZSCAN29Q8IWY8 852 aaPredicted RBP24.64■■□□□ 1.53
CDR2-201ENST00000268383 NDST4Q9H3R1 872 aa24.64■■□□□ 1.53
CDR2-201ENST00000268383 LRRC53A6NM62 1247 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 AGPSO00116 658 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 AMOTL1Q8IY63 956 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 EHBP1Q8NDI1 1231 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 PNMA5Q96PV4 448 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 DEF6Q9H4E7 631 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 C6orf50Q9HD87 102 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 MED4Q9NPJ6 270 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 ROBO1Q9Y6N7 1651 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 BTDP43251 543 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 APBA1Q02410 837 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 CKAP4Q07065 602 aaKnown RBP24.63■■□□□ 1.53
CDR2-201ENST00000268383 FAM98CQ17RN3 349 aaKnown RBP24.63■■□□□ 1.53
CDR2-201ENST00000268383 VWA3BQ502W6 1294 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 GALNT17Q6IS24 598 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 AK8Q96MA6 479 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 ACBD3Q9H3P7 528 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 SIK3Q9Y2K2 1263 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 TUBBP07437 444 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 SOGA3Q5TF21 947 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 FAM114A1Q8IWE2 563 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 RETREG2Q8NC44 543 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 CALML4Q96GE6 196 aa24.63■■□□□ 1.53
CDR2-201ENST00000268383 BUB1O43683 1085 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 ZPR1O75312 459 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 CNNM4Q6P4Q7 775 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 TPTE2Q6XPS3 522 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 SV2BQ7L1I2 683 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 AFAP1L1Q8TED9 768 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 SNX12Q9UMY4 172 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 PLAGL2Q9UPG8 496 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 EDIL3O43854 480 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 AKR1B10O60218 316 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 BAG3O95817 575 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 GFPT1Q06210 699 aaPredicted RBP24.62■■□□□ 1.53
CDR2-201ENST00000268383 CENPPQ6IPU0 288 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 NYXQ9GZU5 481 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 CUEDC2Q9H467 287 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 SEC63Q9UGP8 760 aaKnown RBP24.62■■□□□ 1.53
CDR2-201ENST00000268383 NARFQ9UHQ1 456 aa24.62■■□□□ 1.53
CDR2-201ENST00000268383 REXO1Q8N1G1 1221 aaKnown RBP24.61■■□□□ 1.53
CDR2-201ENST00000268383 CRACR2AQ9BSW2 395 aa24.61■■□□□ 1.53
CDR2-201ENST00000268383 SPZ1Q9BXG8 430 aa24.61■■□□□ 1.53
CDR2-201ENST00000268383 RTFDC1Q9BY42 306 aaPredicted RBP24.61■■□□□ 1.53
CDR2-201ENST00000268383 SH2D4AQ9H788 454 aa24.61■■□□□ 1.53
CDR2-201ENST00000268383 NLRC4Q9NPP4 1024 aa24.61■■□□□ 1.53
CDR2-201ENST00000268383 TBC1D7Q9P0N9 293 aa24.61■■□□□ 1.53
CDR2-201ENST00000268383 COL5A3P25940 1745 aaPredicted RBP24.61■■□□□ 1.53
CDR2-201ENST00000268383 SNED1Q8TER0 1413 aa24.61■■□□□ 1.53
CDR2-201ENST00000268383 AARSP49588 968 aaKnown RBP eCLIP24.61■■□□□ 1.53
CDR2-201ENST00000268383 MAP9Q49MG5 647 aa24.61■■□□□ 1.53
CDR2-201ENST00000268383 ZNF662Q6ZS27 426 aa24.61■■□□□ 1.53
CDR2-201ENST00000268383 WDR66Q8TBY9 1149 aa24.61■■□□□ 1.53
CDR2-201ENST00000268383 CALCRLQ16602 461 aa24.6■■□□□ 1.53
CDR2-201ENST00000268383 SND1Q7KZF4 910 aaKnown RBP eCLIP24.6■■□□□ 1.53
CDR2-201ENST00000268383 TANGO6Q9C0B7 1094 aa24.6■■□□□ 1.53
CDR2-201ENST00000268383 EHD4Q9H223 541 aa24.6■■□□□ 1.53
CDR2-201ENST00000268383 TARSL2A2RTX5 802 aaKnown RBP24.6■■□□□ 1.53
CDR2-201ENST00000268383 GNA11P29992 359 aa24.6■■□□□ 1.53
CDR2-201ENST00000268383 ECM1Q16610 540 aa24.6■■□□□ 1.53
CDR2-201ENST00000268383 LRRC47Q8N1G4 583 aaKnown RBP24.6■■□□□ 1.53
CDR2-201ENST00000268383 MS4A14Q96JA4 679 aa24.6■■□□□ 1.53
CDR2-201ENST00000268383 VIPAS39Q9H9C1 493 aa24.6■■□□□ 1.53
CDR2-201ENST00000268383 ROBO3Q96MS0 1386 aa24.6■■□□□ 1.53
CDR2-201ENST00000268383 ANO9A1A5B4 782 aa24.59■■□□□ 1.53
CDR2-201ENST00000268383 AMPD3Q01432 767 aa24.59■■□□□ 1.53
CDR2-201ENST00000268383 RASSF7Q02833 373 aa24.59■■□□□ 1.53
CDR2-201ENST00000268383 TEX11Q8IYF3 940 aa24.59■■□□□ 1.53
CDR2-201ENST00000268383 LARP4BQ92615 738 aaKnown RBP24.59■■□□□ 1.53
CDR2-201ENST00000268383 SPATA31A5Q5VU36 1347 aa24.59■■□□□ 1.53
CDR2-201ENST00000268383 SPATA31A7Q8IWB4 1347 aa24.59■■□□□ 1.53
CDR2-201ENST00000268383 ENOX2Q16206 610 aaKnown RBP24.59■■□□□ 1.53
CDR2-201ENST00000268383 KCTD19Q17RG1 926 aaPredicted RBP24.59■■□□□ 1.53
CDR2-201ENST00000268383 GOLGA6L1Q8N7Z2 621 aa24.59■■□□□ 1.53
CDR2-201ENST00000268383 CDK5RAP3Q96JB5 506 aa24.59■■□□□ 1.53
CDR2-201ENST00000268383 THRAP3Q9Y2W1 955 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms