RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 ARHGAP45Q92619 1136 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 C17orf80Q9BSJ5 609 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 RNF146Q9NTX7 359 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 FAM86C1Q9NVL1 165 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 ISY1Q9ULR0 285 aaKnown RBP11.79□□□□□ -0.52
SYCP3-201ENST00000266743 EXOC6BQ9Y2D4 811 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 COG6Q9Y2V7 657 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 NOP58Q9Y2X3 529 aaKnown RBP11.79□□□□□ -0.52
SYCP3-201ENST00000266743 ASB14A6NK59 587 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 RASA1P20936 1047 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 RFC2P35250 354 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 ERVK-21P61565 698 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 MUM1L1Q5H9M0 696 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 IQSEC1Q6DN90 963 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 NEK9Q8TD19 979 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 ZDHHC16Q969W1 377 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 TGS1Q96RS0 853 aaKnown RBP11.78□□□□□ -0.52
SYCP3-201ENST00000266743 ACAD9Q9H845 621 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 ATP8A2Q9NTI2 1148 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 MUTYHQ9UIF7 546 aa11.78□□□□□ -0.52
SYCP3-201ENST00000266743 ALAS1P13196 640 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 IRS1P35568 1242 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
SYCP3-201ENST00000266743 CLUL1Q15846 466 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 COPS5Q92905 334 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 SEZ6LQ9BYH1 1024 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 KCNH6Q9H252 994 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 NYAP2Q9P242 653 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 SLC4A4Q9Y6R1 1079 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 USP34Q70CQ2 3546 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 CFAP54Q96N23 3096 aa11.77□□□□□ -0.53
SYCP3-201ENST00000266743 PRDM1O75626 825 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 DUSP28Q4G0W2 176 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 TCEAL5Q5H9L2 206 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 OR6J1Q8NGC5 347 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 TRERF1Q96PN7 1200 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 RAD9AQ99638 391 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 MTG1Q9BT17 334 aaPredicted RBP11.76□□□□□ -0.53
SYCP3-201ENST00000266743 WDR11Q9BZH6 1224 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 FEM1BQ9UK73 627 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 Q9Y3F1 56 aa11.76□□□□□ -0.53
SYCP3-201ENST00000266743 CACNA1AO00555 2505 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 TMEM232C9JQI7 657 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 NBNO60934 754 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 BAIAP3O94812 1187 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 GJB5O95377 273 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 CT47B1P0C2W7 299 aaPredicted RBP11.75□□□□□ -0.53
SYCP3-201ENST00000266743 ADD2P35612 726 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.53
SYCP3-201ENST00000266743 TCF15Q12870 199 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 TMED8Q6PL24 325 aaPredicted RBP11.75□□□□□ -0.53
SYCP3-201ENST00000266743 NSMFQ6X4W1 530 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 RASGRP2Q7LDG7 609 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 AMOTL1Q8IY63 956 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 DHX38Q92620 1227 aaKnown RBP11.75□□□□□ -0.53
SYCP3-201ENST00000266743 MFSD14AQ96MC6 490 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 CTAGE1Q96RT6 745 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 TET1Q8NFU7 2136 aa11.75□□□□□ -0.53
SYCP3-201ENST00000266743 IGKV6D-41A0A0C4DH26 115 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 MINDY4BA8MYZ0 360 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 GFRA3O60609 400 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 OAZ1P54368 228 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 BFSP2Q13515 415 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 PTGISQ16647 500 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 SLFN13Q68D06 897 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 TYW1BQ6NUM6 668 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.74□□□□□ -0.53
SYCP3-201ENST00000266743 ADHFE1Q8IWW8 467 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 CEP95Q96GE4 821 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 EPAS1Q99814 870 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 PUS7LQ9H0K6 701 aaKnown RBP11.74□□□□□ -0.53
SYCP3-201ENST00000266743 BOLA2Q9H3K6 86 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 VTA1Q9NP79 307 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 ZNF318Q5VUA4 2279 aa11.74□□□□□ -0.53
SYCP3-201ENST00000266743 TRIOO75962 3097 aa11.73□□□□□ -0.53
SYCP3-201ENST00000266743 CSPG5O95196 566 aa11.73□□□□□ -0.53
SYCP3-201ENST00000266743 BMP3P12645 472 aa11.73□□□□□ -0.53
SYCP3-201ENST00000266743 CPT1AP50416 773 aa11.73□□□□□ -0.53
SYCP3-201ENST00000266743 DLX2Q07687 328 aaPredicted RBP11.73□□□□□ -0.53
SYCP3-201ENST00000266743 IKQ13123 557 aaPredicted RBP11.73□□□□□ -0.53
SYCP3-201ENST00000266743 PUS10Q3MIT2 529 aaKnown RBP11.73□□□□□ -0.53
SYCP3-201ENST00000266743 GDF6Q6KF10 455 aaPredicted RBP11.73□□□□□ -0.53
SYCP3-201ENST00000266743 ZBED9Q6R2W3 1325 aa11.73□□□□□ -0.53
SYCP3-201ENST00000266743 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
SYCP3-201ENST00000266743 DDX12PQ92771 950 aa11.73□□□□□ -0.53
SYCP3-201ENST00000266743 MRPL38Q96DV4 380 aaKnown RBP11.73□□□□□ -0.53
SYCP3-201ENST00000266743 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
SYCP3-201ENST00000266743 CLDND1Q9NY35 253 aa11.73□□□□□ -0.53
SYCP3-201ENST00000266743 PCDHGA10Q9Y5H3 936 aa11.73□□□□□ -0.53
SYCP3-201ENST00000266743 IPO8O15397 1037 aaKnown RBP11.72□□□□□ -0.53
SYCP3-201ENST00000266743 LTBRP36941 435 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms